Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3089
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,455,528 | + | Rv3088 | 0.83 | -0.9 | |
3,455,975 | - | Rv3089 | 0.14 | -0.2 | |
3,456,009 | + | Rv3089 | 0.16 | +0.3 | |
3,456,009 | + | Rv3089 | 0.16 | -0.6 | |
3,456,248 | - | Rv3089 | 0.32 | -0.7 | |
3,456,628 | + | Rv3089 | 0.57 | -1.2 | |
3,457,162 | + | -0.1 | |||
3,457,163 | - | -0.3 | |||
3,457,163 | - | -0.6 | |||
3,457,508 | - | -0.2 | |||
3,458,127 | - | -0.7 | |||
3,458,239 | + | +0.7 |
Or see this region's nucleotide sequence