Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2942

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
3,284,212	+		Rv2941	0.50	-0.5
3,284,212	+		Rv2941	0.50	-0.7
3,284,213	-		Rv2941	0.50	-1.2
3,284,213	-		Rv2941	0.50	-2.1
3,284,213	-		Rv2941	0.50	-0.1
3,284,213	-		Rv2941	0.50	-0.9
3,284,213	-		Rv2941	0.50	-0.1
3,284,213	-		Rv2941	0.50	-0.4
3,284,213	-		Rv2941	0.50	-0.7
3,284,344	-		Rv2941	0.58	-0.7
3,284,344	-		Rv2941	0.58	-1.3
3,284,344	-		Rv2941	0.58	-2.0
3,284,393	+		Rv2941	0.61	-0.9
3,284,444	+		Rv2941	0.64	+0.4
3,284,460	+		Rv2941	0.65	-0.8
3,284,460	+		Rv2941	0.65	-0.6
3,284,460	+		Rv2941	0.65	-0.8
3,284,460	+		Rv2941	0.65	-1.4
3,284,461	-		Rv2941	0.65	-1.6
3,284,461	-		Rv2941	0.65	-0.8
3,284,999	+				-0.8
3,285,076	-				-1.2
3,285,093	-				-1.8
3,285,106	+				+1.8
3,285,107	-				-1.5
3,285,109	-				-1.4
3,285,109	-				-1.5
3,285,369	+		Rv2942	0.11	-0.0
3,285,369	+		Rv2942	0.11	-1.3
3,285,424	+		Rv2942	0.13	-2.3
3,285,427	+		Rv2942	0.13	-1.4
3,285,427	+		Rv2942	0.13	-2.5
3,285,427	+		Rv2942	0.13	+1.8
3,285,427	+		Rv2942	0.13	-1.3
3,285,428	-		Rv2942	0.13	-0.4
3,285,428	-		Rv2942	0.13	-0.4
3,285,428	-		Rv2942	0.13	-0.8
3,285,428	-		Rv2942	0.13	+0.5
3,285,428	-		Rv2942	0.13	-2.6
3,285,699	-		Rv2942	0.23	-0.2
3,285,752	+		Rv2942	0.25	-0.1
3,285,753	-		Rv2942	0.25	-0.9
3,285,988	+		Rv2942	0.33	-0.7
3,286,038	-		Rv2942	0.35	-0.9
3,286,100	+		Rv2942	0.37	-2.2
3,286,100	+		Rv2942	0.37	-0.9
3,286,101	-		Rv2942	0.37	-0.4
3,286,178	+		Rv2942	0.40	-1.8
3,286,280	+		Rv2942	0.44	-2.4
3,286,280	+		Rv2942	0.44	-0.9
3,286,280	+		Rv2942	0.44	-1.6
3,286,281	-		Rv2942	0.44	-1.3
3,286,696	+		Rv2942	0.59	-0.7
3,286,697	-		Rv2942	0.59	-1.3
3,286,697	-		Rv2942	0.59	-0.8
3,286,760	-		Rv2942	0.61	-0.7
3,286,760	-		Rv2942	0.61	-0.9
3,286,976	+		Rv2942	0.69	-2.1
3,286,976	+		Rv2942	0.69	-1.6
3,286,998	-		Rv2942	0.70	-1.9
3,287,039	+		Rv2942	0.71	-2.1
3,287,040	-		Rv2942	0.71	-1.6
3,287,151	-		Rv2942	0.75	-2.0
3,287,151	-		Rv2942	0.75	+3.3
3,287,201	-		Rv2942	0.77	-1.2
3,287,201	-		Rv2942	0.77	-1.6
3,287,278	+		Rv2942	0.80	-1.1
3,287,379	+		Rv2942	0.84	-3.4
3,287,464	+		Rv2942	0.87	-1.1
3,287,464	+		Rv2942	0.87	-0.9
3,287,464	+		Rv2942	0.87	-0.7
3,287,464	+		Rv2942	0.87	-0.2
3,287,465	-		Rv2942	0.87	+0.3
3,287,465	-		Rv2942	0.87	-1.0
3,287,507	+		Rv2942	0.88	+1.8
3,287,508	-		Rv2942	0.88	-1.7
3,287,693	+				-0.4
3,287,957	+				-0.3
3,287,957	+				+0.3
3,288,047	-				-0.4
3,288,047	-				-0.7
3,288,247	+				-2.3
3,288,247	+				+1.3
3,288,248	-				-0.2
3,288,248	-				+1.0
3,288,304	+				+0.4
3,288,304	+				-1.2
3,288,305	-				-0.4
3,288,671	+		Rv2943	0.17	-0.6
3,288,768	-		Rv2943	0.24	-0.8
3,288,800	+		Rv2943	0.27	+0.1
3,288,800	+		Rv2943	0.27	+0.8
3,288,801	-		Rv2943	0.27	-1.0
3,288,801	-		Rv2943	0.27	-0.3
3,288,801	-		Rv2943	0.27	-1.2