Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2939

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
3,273,955	+		Rv2937	0.86	-1.2
3,273,955	+		Rv2937	0.86	-0.1
3,273,956	-		Rv2937	0.86	-0.5
3,274,184	+		Rv2938	0.13	-1.8
3,274,185	-		Rv2938	0.14	-1.7
3,274,204	+		Rv2938	0.16	-1.3
3,274,205	-		Rv2938	0.16	-2.2
3,274,206	+		Rv2938	0.16	-1.1
3,274,206	+		Rv2938	0.16	-1.9
3,274,207	-		Rv2938	0.16	+0.9
3,274,269	-		Rv2938	0.24	-0.6
3,274,269	-		Rv2938	0.24	-2.2
3,274,269	-		Rv2938	0.24	-2.0
3,274,272	+		Rv2938	0.24	-2.3
3,274,277	+		Rv2938	0.25	-1.4
3,274,277	+		Rv2938	0.25	-1.2
3,274,277	+		Rv2938	0.25	-1.5
3,274,277	+		Rv2938	0.25	-0.2
3,274,277	+		Rv2938	0.25	-1.7
3,274,278	-		Rv2938	0.25	-1.2
3,274,278	-		Rv2938	0.25	-1.4
3,274,282	+		Rv2938	0.25	-1.1
3,274,282	+		Rv2938	0.25	+2.6
3,274,283	-		Rv2938	0.25	-1.5
3,274,283	-		Rv2938	0.25	-1.3
3,274,283	-		Rv2938	0.25	-2.4
3,274,309	+		Rv2938	0.29	-1.4
3,274,310	-		Rv2938	0.29	-2.3
3,274,502	+		Rv2938	0.52	+0.6
3,274,502	+		Rv2938	0.52	-1.0
3,274,502	+		Rv2938	0.52	+1.8
3,274,502	+		Rv2938	0.52	+0.8
3,274,503	-		Rv2938	0.52	-1.5
3,274,503	-		Rv2938	0.52	-1.4
3,274,507	-		Rv2938	0.52	-0.4
3,274,517	+		Rv2938	0.54	-0.4
3,274,567	-		Rv2938	0.60	-1.4
3,274,567	-		Rv2938	0.60	-2.1
3,274,611	+		Rv2938	0.65	-1.5
3,274,611	+		Rv2938	0.65	-2.0
3,274,759	+		Rv2938	0.83	-0.2
3,274,759	+		Rv2938	0.83	-1.2
3,274,760	-		Rv2938	0.83	+1.0
3,274,853	+				-0.7
3,274,854	-				-1.2
3,275,018	-				-1.1
3,275,259	+		Rv2939	0.24	+0.0
3,275,307	+		Rv2939	0.28	-0.5
3,275,307	+		Rv2939	0.28	-1.0
3,275,309	+		Rv2939	0.28	-1.6
3,275,309	+		Rv2939	0.28	-0.9
3,275,309	+		Rv2939	0.28	-0.6
3,275,309	+		Rv2939	0.28	-2.0
3,275,309	+		Rv2939	0.28	-1.1
3,275,309	+		Rv2939	0.28	-0.9
3,275,310	-		Rv2939	0.28	-0.4
3,275,310	-		Rv2939	0.28	-1.3
3,275,310	-		Rv2939	0.28	-0.9
3,275,500	+		Rv2939	0.43	-1.0
3,275,501	-		Rv2939	0.43	-1.1
3,275,501	-		Rv2939	0.43	-0.4
3,275,513	+		Rv2939	0.44	-1.2
3,275,513	+		Rv2939	0.44	-0.7
3,275,513	+		Rv2939	0.44	-0.8
3,275,513	+		Rv2939	0.44	-0.8
3,275,513	+		Rv2939	0.44	-0.6
3,275,513	+		Rv2939	0.44	-0.9
3,275,513	+		Rv2939	0.44	-0.2
3,275,513	+		Rv2939	0.44	-1.1
3,275,513	+		Rv2939	0.44	+0.5
3,275,513	+		Rv2939	0.44	-1.1
3,275,514	-		Rv2939	0.45	+1.0
3,275,514	-		Rv2939	0.45	+1.0
3,275,514	-		Rv2939	0.45	+1.0
3,275,520	-		Rv2939	0.45	-0.6
3,275,520	-		Rv2939	0.45	-1.2
3,275,738	+		Rv2939	0.62	-0.6
3,275,764	-		Rv2939	0.64	-0.9
3,275,791	+		Rv2939	0.66	-1.1
3,275,791	+		Rv2939	0.66	-2.7
3,275,792	-		Rv2939	0.66	-0.2
3,275,792	-		Rv2939	0.66	-0.7
3,275,839	+		Rv2939	0.70	-1.2
3,275,962	-		Rv2939	0.80	-1.0
3,276,040	+		Rv2939	0.86	-1.2
3,276,040	+		Rv2939	0.86	-0.8
3,276,041	-		Rv2939	0.86	-1.3
3,276,053	+		Rv2939	0.87	-0.0
3,276,054	-		Rv2939	0.87	-0.7
3,276,084	-		Rv2939	0.89	-1.9
3,276,084	-		Rv2939	0.89	+0.4
3,276,098	+				-1.6
3,276,165	+				-0.8
3,276,166	-				-0.7
3,276,197	+				-0.7
3,276,197	+				-1.7
3,276,514	+				-1.4
3,276,515	-				-0.9
3,276,515	-				-1.6
3,276,550	-				-1.3
3,276,550	-				-0.7
3,276,623	+				-1.8
3,276,822	+				-1.5
3,276,823	-				-1.7
3,276,823	-				-0.2
3,276,981	+				-0.1
3,277,071	-		Rv2940c	0.11	-1.6
3,277,071	-		Rv2940c	0.11	-0.7