Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2897c and Rv2898c overlap by 1 nucleotides Rv2898c and Rv2899c are separated by 247 nucleotides Rv2899c and Rv2900c overlap by 1 nucleotides
Rv2897c: Rv2897c - Conserved hypothetical protein, at 3,206,431 to 3,207,942
Rv2897c
Rv2898c: Rv2898c - Conserved hypothetical protein, at 3,207,942 to 3,208,328
Rv2898c
Rv2899c: Rv2899c - Possible FdhD protein homolog, at 3,208,576 to 3,209,406
Rv2899c
Rv2900c: Rv2900c - Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H), at 3,209,406 to 3,211,745
Rv2900c
Position (kb)
3208
3209
3210 Strain fitness (log2 ratio)
-2
-1
0
1 at 3208.262 kb on - strand, within Rv2898c at 3208.435 kb on - strand at 3208.485 kb on + strand at 3208.485 kb on + strand at 3208.578 kb on - strand at 3209.069 kb on + strand, within Rv2899c at 3209.139 kb on - strand, within Rv2899c at 3209.510 kb on - strand at 3209.540 kb on - strand at 3209.734 kb on + strand, within Rv2900c at 3209.734 kb on + strand, within Rv2900c at 3209.905 kb on + strand, within Rv2900c at 3209.906 kb on - strand, within Rv2900c at 3209.956 kb on + strand, within Rv2900c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 3,208,262 - Rv2898c 0.83 -2.6 3,208,435 - -1.5 3,208,485 + -0.5 3,208,485 + -0.9 3,208,578 - -0.1 3,209,069 + Rv2899c 0.59 +0.1 3,209,139 - Rv2899c 0.68 -1.1 3,209,510 - +0.9 3,209,540 - -0.1 3,209,734 + Rv2900c 0.14 -0.5 3,209,734 + Rv2900c 0.14 -0.6 3,209,905 + Rv2900c 0.21 -1.2 3,209,906 - Rv2900c 0.21 -0.2 3,209,956 + Rv2900c 0.24 -0.5
Or see this region's nucleotide sequence