Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2702
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,015,899 | + | -1.4 | |||
| 3,015,899 | + | -1.0 | |||
| 3,016,056 | + | Rv2701c | 0.22 | +1.8 | |
| 3,016,056 | + | Rv2701c | 0.22 | -0.3 | |
| 3,016,057 | - | Rv2701c | 0.22 | +0.2 | |
| 3,016,083 | - | Rv2701c | 0.25 | -0.2 | |
| 3,016,302 | + | Rv2701c | 0.50 | -1.0 | |
| 3,016,303 | - | Rv2701c | 0.50 | +0.8 | |
| 3,016,396 | - | Rv2701c | 0.61 | +0.1 | |
| 3,016,741 | + | -0.4 | |||
| 3,016,742 | - | -1.5 | |||
| 3,016,820 | + | -0.9 | |||
| 3,016,820 | + | -0.1 | |||
| 3,016,820 | + | -1.9 | |||
| 3,017,098 | + | Rv2702 | 0.30 | +1.9 | |
| 3,017,579 | + | +0.5 | |||
| 3,017,643 | + | -1.1 | |||
| 3,017,643 | + | -1.2 | |||
| 3,017,688 | + | -0.9 | |||
| 3,017,694 | + | +1.8 | |||
| 3,017,694 | + | -0.9 | |||
| 3,017,694 | + | +1.8 | |||
| 3,017,815 | + | +0.0 |
Or see this region's nucleotide sequence