Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2685 and Rv2686c are separated by 10 nucleotides Rv2686c and Rv2687c overlap by 4 nucleotides Rv2687c and Rv2688c overlap by 4 nucleotides
Rv2685: Rv2685 - Probable arsenic-transport integral membrane protein ArsB1, at 3,001,983 to 3,003,269
Rv2685
Rv2686c: Rv2686c - Antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter, at 3,003,280 to 3,004,038
Rv2686c
Rv2687c: Rv2687c - Antibiotic-transport integral membrane leucine and valine rich protein ABC transporter, at 3,004,035 to 3,004,748
Rv2687c
Rv2688c: Rv2688c - Antibiotic-transport ATP-binding protein ABC transporter, at 3,004,745 to 3,005,650
Rv2688c
Position (kb)
3003
3004
3005 Strain fitness (log2 ratio)
-2
-1
0
1 at 3002.359 kb on + strand, within Rv2685 at 3002.360 kb on - strand, within Rv2685 at 3002.923 kb on + strand, within Rv2685 at 3003.268 kb on - strand at 3003.336 kb on - strand at 3003.356 kb on + strand, within Rv2686c at 3003.656 kb on + strand, within Rv2686c at 3003.657 kb on - strand, within Rv2686c at 3004.064 kb on - strand at 3004.213 kb on + strand, within Rv2687c at 3004.214 kb on - strand, within Rv2687c at 3004.604 kb on - strand, within Rv2687c at 3004.662 kb on - strand, within Rv2687c at 3004.707 kb on + strand at 3004.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 3,002,359 + Rv2685 0.29 +0.7 3,002,360 - Rv2685 0.29 +1.3 3,002,923 + Rv2685 0.73 -0.1 3,003,268 - -0.2 3,003,336 - -0.8 3,003,356 + Rv2686c 0.10 -0.2 3,003,656 + Rv2686c 0.50 -1.6 3,003,657 - Rv2686c 0.50 -1.4 3,004,064 - -1.2 3,004,213 + Rv2687c 0.25 -0.7 3,004,214 - Rv2687c 0.25 -2.3 3,004,604 - Rv2687c 0.80 +0.3 3,004,662 - Rv2687c 0.88 +0.8 3,004,707 + -0.4 3,004,805 - -0.3
Or see this region's nucleotide sequence