Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2634c and Rv2635 are separated by 28 nucleotides Rv2635 and Rv2636 are separated by 0 nucleotides Rv2636 and Rv2637 are separated by 195 nucleotides
Rv2634c: Rv2634c - PE-PGRS family protein PE_PGRS46, at 2,960,105 to 2,962,441
Rv2634c
Rv2635: Rv2635 - Hypothetical protein, at 2,962,470 to 2,962,712
Rv2635
Rv2636: Rv2636 - Conserved hypothetical protein, at 2,962,713 to 2,963,390
Rv2636
Rv2637: Rv2637 - Possible transmembrane protein DedA, at 2,963,586 to 2,964,242
Rv2637
Position (kb)
2962
2963 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2961.539 kb on + strand, within Rv2634c at 2961.540 kb on - strand, within Rv2634c at 2962.178 kb on + strand, within Rv2634c at 2962.178 kb on + strand, within Rv2634c at 2962.178 kb on + strand, within Rv2634c at 2962.178 kb on + strand, within Rv2634c at 2962.182 kb on + strand, within Rv2634c at 2962.183 kb on - strand, within Rv2634c at 2962.183 kb on - strand, within Rv2634c at 2962.183 kb on - strand, within Rv2634c at 2962.202 kb on - strand, within Rv2634c at 2962.258 kb on - strand at 2962.270 kb on - strand at 2962.567 kb on - strand, within Rv2635 at 2962.944 kb on + strand, within Rv2636 at 2962.944 kb on + strand, within Rv2636 at 2962.944 kb on + strand, within Rv2636 at 2962.945 kb on - strand, within Rv2636 at 2962.945 kb on - strand, within Rv2636 at 2962.945 kb on - strand, within Rv2636 at 2963.265 kb on + strand, within Rv2636 at 2963.282 kb on + strand, within Rv2636 at 2963.331 kb on + strand at 2963.331 kb on + strand at 2963.331 kb on + strand at 2963.346 kb on + strand at 2963.543 kb on - strand at 2963.581 kb on + strand at 2963.632 kb on - strand at 2963.632 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 2,961,539 + Rv2634c 0.61 -0.8 2,961,540 - Rv2634c 0.61 -0.2 2,962,178 + Rv2634c 0.89 -2.6 2,962,178 + Rv2634c 0.89 +0.1 2,962,178 + Rv2634c 0.89 -0.9 2,962,178 + Rv2634c 0.89 -1.0 2,962,182 + Rv2634c 0.89 -0.5 2,962,183 - Rv2634c 0.89 +0.3 2,962,183 - Rv2634c 0.89 +0.1 2,962,183 - Rv2634c 0.89 +1.1 2,962,202 - Rv2634c 0.90 -0.5 2,962,258 - +0.5 2,962,270 - -0.0 2,962,567 - Rv2635 0.40 -0.8 2,962,944 + Rv2636 0.34 -1.2 2,962,944 + Rv2636 0.34 -0.4 2,962,944 + Rv2636 0.34 +0.1 2,962,945 - Rv2636 0.34 -0.7 2,962,945 - Rv2636 0.34 +0.7 2,962,945 - Rv2636 0.34 -0.5 2,963,265 + Rv2636 0.81 -0.3 2,963,282 + Rv2636 0.84 -0.6 2,963,331 + -0.7 2,963,331 + +1.2 2,963,331 + +2.8 2,963,346 + +0.2 2,963,543 - -0.5 2,963,581 + -0.7 2,963,632 - -0.0 2,963,632 - +0.2
Or see this region's nucleotide sequence