Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2524c and Rv2525c are separated by 519 nucleotides Rv2525c and Rv2526 are separated by 516 nucleotides Rv2526 and Rv2527 overlap by 4 nucleotides
Rv2524c: Rv2524c - Probable fatty acid synthase Fas (fatty acid synthetase), at 2,840,123 to 2,849,332
Rv2524c
Rv2525c: Rv2525c - Conserved hypothetical protein. Secreted; predicted to be a substrate of the twin arginine translocation (tat) export system., at 2,849,852 to 2,850,574
Rv2525c
Rv2526: Rv2526 - Possible antitoxin VapB17, at 2,851,091 to 2,851,318
Rv2526
Rv2527: Rv2527 - Possible toxin VapC17, at 2,851,315 to 2,851,716
Rv2527
Position (kb)
2849
2850
2851 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2849.348 kb on - strand at 2849.562 kb on - strand at 2849.964 kb on + strand, within Rv2525c at 2849.964 kb on + strand, within Rv2525c at 2849.964 kb on + strand, within Rv2525c at 2849.964 kb on + strand, within Rv2525c at 2849.965 kb on - strand, within Rv2525c at 2850.051 kb on + strand, within Rv2525c at 2850.052 kb on - strand, within Rv2525c at 2850.052 kb on - strand, within Rv2525c at 2850.099 kb on + strand, within Rv2525c at 2850.120 kb on + strand, within Rv2525c at 2850.120 kb on + strand, within Rv2525c at 2850.120 kb on + strand, within Rv2525c at 2850.120 kb on + strand, within Rv2525c at 2850.120 kb on + strand, within Rv2525c at 2850.121 kb on - strand, within Rv2525c at 2850.121 kb on - strand, within Rv2525c at 2850.129 kb on + strand, within Rv2525c at 2850.130 kb on - strand, within Rv2525c at 2850.130 kb on - strand, within Rv2525c at 2850.130 kb on - strand, within Rv2525c at 2850.271 kb on - strand, within Rv2525c at 2850.276 kb on + strand, within Rv2525c at 2850.277 kb on - strand, within Rv2525c at 2850.381 kb on + strand, within Rv2525c at 2850.444 kb on + strand, within Rv2525c at 2850.445 kb on - strand, within Rv2525c at 2850.445 kb on - strand, within Rv2525c at 2850.713 kb on + strand at 2850.714 kb on - strand at 2850.714 kb on - strand at 2850.717 kb on - strand at 2850.732 kb on - strand at 2850.801 kb on + strand at 2850.801 kb on + strand at 2850.802 kb on - strand at 2850.851 kb on + strand at 2850.913 kb on - strand at 2850.913 kb on - strand at 2851.082 kb on + strand at 2851.098 kb on + strand at 2851.436 kb on - strand, within Rv2527 at 2851.436 kb on - strand, within Rv2527 at 2851.436 kb on - strand, within Rv2527 at 2851.460 kb on - strand, within Rv2527 at 2851.490 kb on - strand, within Rv2527 at 2851.551 kb on - strand, within Rv2527
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 2,849,348 - -1.3 2,849,562 - -0.7 2,849,964 + Rv2525c 0.15 -0.6 2,849,964 + Rv2525c 0.15 -0.4 2,849,964 + Rv2525c 0.15 -0.5 2,849,964 + Rv2525c 0.15 -0.8 2,849,965 - Rv2525c 0.16 -0.6 2,850,051 + Rv2525c 0.28 -0.8 2,850,052 - Rv2525c 0.28 -0.9 2,850,052 - Rv2525c 0.28 +0.6 2,850,099 + Rv2525c 0.34 -1.7 2,850,120 + Rv2525c 0.37 -1.2 2,850,120 + Rv2525c 0.37 -0.8 2,850,120 + Rv2525c 0.37 -2.3 2,850,120 + Rv2525c 0.37 -0.9 2,850,120 + Rv2525c 0.37 -1.8 2,850,121 - Rv2525c 0.37 -2.9 2,850,121 - Rv2525c 0.37 -1.0 2,850,129 + Rv2525c 0.38 -2.9 2,850,130 - Rv2525c 0.38 -1.1 2,850,130 - Rv2525c 0.38 -2.4 2,850,130 - Rv2525c 0.38 -0.9 2,850,271 - Rv2525c 0.58 -0.5 2,850,276 + Rv2525c 0.59 -1.6 2,850,277 - Rv2525c 0.59 -1.9 2,850,381 + Rv2525c 0.73 -0.6 2,850,444 + Rv2525c 0.82 -0.5 2,850,445 - Rv2525c 0.82 -1.2 2,850,445 - Rv2525c 0.82 +1.2 2,850,713 + +0.3 2,850,714 - -0.1 2,850,714 - -0.9 2,850,717 - -1.3 2,850,732 - -2.2 2,850,801 + +0.5 2,850,801 + -0.9 2,850,802 - -0.1 2,850,851 + +1.3 2,850,913 - -0.1 2,850,913 - -0.1 2,851,082 + -0.8 2,851,098 + +1.7 2,851,436 - Rv2527 0.30 +0.2 2,851,436 - Rv2527 0.30 +2.8 2,851,436 - Rv2527 0.30 +0.5 2,851,460 - Rv2527 0.36 -0.7 2,851,490 - Rv2527 0.44 -0.5 2,851,551 - Rv2527 0.59 -0.1
Or see this region's nucleotide sequence