Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2411c and Rv2412 are separated by 109 nucleotides Rv2412 and Rv2413c are separated by 15 nucleotides Rv2413c and Rv2414c are separated by 30 nucleotides
Rv2411c: Rv2411c - Conserved hypothetical protein, at 2,708,310 to 2,709,965
Rv2411c
Rv2412: Rv2412 - 30S ribosomal protein S20 RpsT, at 2,710,075 to 2,710,335
Rv2412
Rv2413c: Rv2413c - Conserved hypothetical protein, at 2,710,351 to 2,711,301
Rv2413c
Rv2414c: Rv2414c - Conserved hypothetical protein, at 2,711,332 to 2,712,876
Rv2414c
Position (kb)
2710
2711
2712 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 2709.376 kb on + strand, within Rv2411c at 2709.376 kb on + strand, within Rv2411c at 2709.377 kb on - strand, within Rv2411c at 2709.377 kb on - strand, within Rv2411c at 2709.377 kb on - strand, within Rv2411c at 2709.577 kb on + strand, within Rv2411c at 2709.577 kb on + strand, within Rv2411c at 2709.577 kb on + strand, within Rv2411c at 2709.578 kb on - strand, within Rv2411c at 2709.578 kb on - strand, within Rv2411c at 2709.592 kb on + strand, within Rv2411c at 2709.593 kb on - strand, within Rv2411c at 2709.593 kb on - strand, within Rv2411c at 2709.799 kb on + strand, within Rv2411c at 2709.799 kb on + strand, within Rv2411c at 2709.799 kb on + strand, within Rv2411c at 2709.799 kb on + strand, within Rv2411c at 2709.803 kb on + strand at 2709.803 kb on + strand at 2709.865 kb on + strand at 2709.883 kb on + strand at 2711.308 kb on - strand at 2711.308 kb on - strand at 2711.377 kb on + strand at 2711.377 kb on + strand at 2711.377 kb on + strand at 2711.378 kb on - strand at 2711.378 kb on - strand at 2711.378 kb on - strand at 2711.378 kb on - strand at 2711.378 kb on - strand at 2711.473 kb on + strand at 2711.474 kb on - strand at 2711.474 kb on - strand at 2711.474 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 2,709,376 + Rv2411c 0.64 +0.2 2,709,376 + Rv2411c 0.64 +3.1 2,709,377 - Rv2411c 0.64 +0.0 2,709,377 - Rv2411c 0.64 +0.8 2,709,377 - Rv2411c 0.64 +0.6 2,709,577 + Rv2411c 0.77 +1.4 2,709,577 + Rv2411c 0.77 +2.3 2,709,577 + Rv2411c 0.77 -0.7 2,709,578 - Rv2411c 0.77 -0.7 2,709,578 - Rv2411c 0.77 +1.8 2,709,592 + Rv2411c 0.77 -1.0 2,709,593 - Rv2411c 0.77 -0.9 2,709,593 - Rv2411c 0.77 +1.8 2,709,799 + Rv2411c 0.90 -0.7 2,709,799 + Rv2411c 0.90 -0.4 2,709,799 + Rv2411c 0.90 -0.2 2,709,799 + Rv2411c 0.90 -0.8 2,709,803 + +0.2 2,709,803 + +1.8 2,709,865 + -0.9 2,709,883 + -0.0 2,711,308 - -0.8 2,711,308 - -0.9 2,711,377 + -0.4 2,711,377 + -0.9 2,711,377 + -0.5 2,711,378 - +4.8 2,711,378 - -0.2 2,711,378 - +0.5 2,711,378 - -0.2 2,711,378 - -0.2 2,711,473 + +0.2 2,711,474 - +0.3 2,711,474 - -1.0 2,711,474 - -0.9
Or see this region's nucleotide sequence