Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2340c

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
2,616,968	-		Rv2339	0.79	-0.5
2,616,995	-		Rv2339	0.80	-0.3
2,617,097	+		Rv2339	0.83	+0.6
2,617,114	-		Rv2339	0.84	-0.6
2,617,222	+		Rv2339	0.88	-0.1
2,617,222	+		Rv2339	0.88	+0.0
2,617,223	-		Rv2339	0.88	+0.4
2,617,223	-		Rv2339	0.88	-0.2
2,617,272	-		Rv2339	0.89	+0.2
2,617,334	+				+0.1
2,617,334	+				+0.4
2,617,415	+				-0.7
2,617,416	-				-0.9
2,617,473	-				+0.2
2,617,473	-				-0.7
2,617,582	+				-0.8
2,617,583	-				-0.4
2,617,583	-				-0.5
2,617,741	+				-0.5
2,617,741	+				+1.2
2,617,741	+				+0.3
2,617,741	+				-0.5
2,617,742	-				-1.4
2,617,742	-				+0.2
2,617,742	-				+0.5
2,617,803	-		Rv2340c	0.11	+0.8
2,617,847	+		Rv2340c	0.14	-1.5
2,617,847	+		Rv2340c	0.14	-0.7
2,617,848	-		Rv2340c	0.15	-2.2
2,617,848	-		Rv2340c	0.15	+0.0
2,617,848	-		Rv2340c	0.15	-1.3
2,618,650	-		Rv2340c	0.79	-0.5
2,618,713	+		Rv2340c	0.84	-0.3
2,618,724	+		Rv2340c	0.85	+0.1
2,618,724	+		Rv2340c	0.85	-1.3
2,618,724	+		Rv2340c	0.85	-0.8
2,618,725	-		Rv2340c	0.85	-0.5
2,618,725	-		Rv2340c	0.85	-0.4
2,618,837	-				+0.2
2,618,855	+				-0.1
2,618,908	+				-0.9
2,618,908	+				-0.6
2,619,024	+				+0.5
2,619,025	-				-0.3
2,619,025	-				+0.5
2,619,152	+				+0.2
2,619,153	-				-0.6
2,619,153	-				-1.7
2,619,153	-				-0.7
2,619,348	+				-0.3
2,619,349	-				+0.5
2,619,349	-				+2.8
2,619,349	-				+0.5
2,619,349	-				+0.3
2,619,349	-				-0.8
2,619,524	-				-0.8
2,619,529	-				-0.2
2,619,529	-				-0.1
2,619,529	-				-0.7
2,619,529	-				+0.3
2,619,529	-				-0.5
2,619,550	+				-1.3
2,619,551	-				-0.9
2,619,604	+				-0.4
2,619,604	+				+0.1
2,619,605	-				-0.3
2,619,605	-				-2.0
2,619,605	-				-1.2
2,619,843	+		Rv2341	0.59	+0.3
2,619,844	-		Rv2341	0.59	-0.6
2,619,844	-		Rv2341	0.59	-0.5
2,619,844	-		Rv2341	0.59	-0.6
2,619,844	-		Rv2341	0.59	-0.1