Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1668c

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
1,893,262	+		Rv1666c	0.77	-0.6
1,893,471	+				-0.2
1,893,471	+				+0.3
1,893,472	-				-1.5
1,893,472	-				+0.8
1,893,477	+				+2.7
1,893,477	+				-2.2
1,893,477	+				-0.4
1,893,478	-				-1.0
1,893,478	-				-0.3
1,893,478	-				+1.8
1,893,525	+				+0.1
1,893,571	-				-0.8
1,893,571	-				-1.2
1,893,571	-				-1.3
1,893,646	+		Rv1667c	0.11	-1.2
1,893,646	+		Rv1667c	0.11	+0.3
1,893,646	+		Rv1667c	0.11	-0.0
1,893,646	+		Rv1667c	0.11	-0.0
1,893,646	+		Rv1667c	0.11	-1.4
1,893,646	+		Rv1667c	0.11	+0.5
1,893,646	+		Rv1667c	0.11	-0.1
1,893,647	-		Rv1667c	0.11	-1.0
1,893,647	-		Rv1667c	0.11	-0.1
1,893,647	-		Rv1667c	0.11	+1.9
1,893,647	-		Rv1667c	0.11	+0.7
1,893,647	-		Rv1667c	0.11	-0.3
1,893,708	+		Rv1667c	0.20	-0.8
1,893,864	-		Rv1667c	0.44	-1.0
1,893,914	+		Rv1667c	0.52	-1.2
1,893,972	+		Rv1667c	0.60	-0.3
1,894,166	-				-0.2
1,894,166	-				-0.9
1,894,166	-				-0.2
1,894,225	+				-2.7
1,894,457	-		Rv1668c	0.21	+0.1
1,894,457	-		Rv1668c	0.21	-0.5
1,894,712	-		Rv1668c	0.44	-0.1
1,894,815	+		Rv1668c	0.53	-0.5
1,894,827	-		Rv1668c	0.54	+0.6
1,894,848	+		Rv1668c	0.56	+0.9
1,894,848	+		Rv1668c	0.56	+3.9
1,895,331	+				-1.5
1,895,332	-				-0.9
1,895,354	+				-0.1
1,895,354	+				+0.2
1,895,354	+				-0.4
1,895,354	+				+0.6
1,895,354	+				+1.0
1,895,354	+				-0.3
1,895,354	+				-0.8
1,895,652	-				-0.4
1,895,876	+		Rv1669	0.42	-0.9
1,895,877	-		Rv1669	0.42	-0.1
1,895,891	+		Rv1669	0.46	-1.4
1,895,960	+		Rv1669	0.65	+0.4
1,895,961	-		Rv1669	0.65	-0.4
1,896,005	-		Rv1669	0.77	-0.3
1,896,280	-		Rv1670	0.46	+0.3
1,896,280	-		Rv1670	0.46	-0.8
1,896,303	+		Rv1670	0.53	+0.0
1,896,334	-		Rv1670	0.61	+0.4
1,896,334	-		Rv1670	0.61	+0.1
1,896,336	+		Rv1670	0.62	+0.2