Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1411c

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
1,587,077	+		Rv1410c	0.56	-0.5
1,587,077	+		Rv1410c	0.56	+1.8
1,587,077	+		Rv1410c	0.56	-1.1
1,587,078	-		Rv1410c	0.56	-1.0
1,587,105	+		Rv1410c	0.57	-2.3
1,587,106	-		Rv1410c	0.58	-2.1
1,587,218	+		Rv1410c	0.65	+0.8
1,587,219	-		Rv1410c	0.65	+1.8
1,587,219	-		Rv1410c	0.65	+0.7
1,587,219	-		Rv1410c	0.65	-1.6
1,587,413	+		Rv1410c	0.77	-1.9
1,587,595	-		Rv1410c	0.89	-1.7
1,587,595	-		Rv1410c	0.89	-2.1
1,587,606	+		Rv1410c	0.90	-2.5
1,587,607	-		Rv1410c	0.90	-1.5
1,587,607	-		Rv1410c	0.90	-2.8
1,587,652	+				-0.8
1,587,653	-				-1.9
1,587,653	-				-1.1
1,587,653	-				-1.6
1,587,653	-				-1.3
1,587,696	+				-2.4
1,587,696	+				+1.8
1,587,696	+				-2.2
1,587,696	+				+0.8
1,587,697	-				-2.5
1,587,697	-				+1.8
1,587,697	-				-0.8
1,587,697	-				-2.8
1,587,697	-				-3.7
1,587,697	-				-1.2
1,587,720	-				-1.8
1,587,836	+				-0.9
1,587,943	+		Rv1411c	0.24	-1.5
1,588,009	-		Rv1411c	0.33	+0.8
1,588,095	-		Rv1411c	0.45	-2.6
1,588,095	-		Rv1411c	0.45	+0.8
1,588,148	+		Rv1411c	0.53	-0.8
1,588,149	-		Rv1411c	0.53	-1.0
1,588,185	+		Rv1411c	0.58	-1.4
1,588,482	+				-1.0
1,589,226	-				+0.0
1,589,354	+				-0.5
1,589,354	+				-0.3
1,589,355	-				-0.1
1,589,411	+				-1.0
1,589,411	+				-0.6
1,589,412	-				+0.2
1,589,438	+		Rv1413	0.10	-2.5
1,589,439	-		Rv1413	0.10	-0.5
1,589,439	-		Rv1413	0.10	-0.2
1,589,439	-		Rv1413	0.10	-1.6
1,589,439	-		Rv1413	0.10	+1.1
1,589,439	-		Rv1413	0.10	+1.0
1,589,449	+		Rv1413	0.12	+0.2
1,589,449	+		Rv1413	0.12	+0.0
1,589,450	-		Rv1413	0.12	-0.5
1,589,450	-		Rv1413	0.12	+0.4