Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1372

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
1,544,064	+		Rv1371	0.48	-1.1
1,544,147	+		Rv1371	0.54	+0.0
1,544,462	-		Rv1371	0.75	-0.2
1,544,698	-				-0.7
1,545,386	+		Rv1372	0.47	-2.6
1,545,387	-		Rv1372	0.48	-2.2
1,545,567	+		Rv1372	0.63	+0.8
1,545,881	-		Rv1372	0.89	-0.3
1,546,048	+				-1.1
1,546,113	+		Rv1373	0.10	+0.4
1,546,113	+		Rv1373	0.10	-0.2
1,546,113	+		Rv1373	0.10	-0.2
1,546,114	-		Rv1373	0.10	+0.9
1,546,261	-		Rv1373	0.25	-0.9
1,546,343	-		Rv1373	0.34	-0.4
1,546,343	-		Rv1373	0.34	+1.8
1,546,343	-		Rv1373	0.34	-1.4
1,546,343	-		Rv1373	0.34	-0.8
1,546,343	-		Rv1373	0.34	+1.5
1,546,353	-		Rv1373	0.35	-2.0
1,546,391	-		Rv1373	0.39	-1.7
1,546,443	-		Rv1373	0.44	-1.4
1,546,443	-		Rv1373	0.44	-0.8
1,546,443	-		Rv1373	0.44	+0.9
1,546,556	+		Rv1373	0.55	+0.8
1,546,557	-		Rv1373	0.56	-0.9
1,546,557	-		Rv1373	0.56	-0.7
1,546,557	-		Rv1373	0.56	+0.6
1,546,557	-		Rv1373	0.56	-0.5
1,546,557	-		Rv1373	0.56	-1.0
1,546,610	+		Rv1373	0.61	-0.3
1,546,610	+		Rv1373	0.61	-2.3
1,546,637	+		Rv1373	0.64	-0.3
1,546,670	-		Rv1373	0.67	+1.8
1,546,760	-		Rv1373	0.76	+0.6
1,546,806	+		Rv1373	0.81	+1.8
1,546,807	-		Rv1373	0.81	-0.1
1,546,807	-		Rv1373	0.81	-0.8
1,546,909	+				-0.5
1,546,909	+				-0.1
1,546,910	-				+0.3
1,546,910	-				+0.2
1,546,910	-				-0.4
1,546,910	-				-0.4
1,546,975	+				-0.1
1,546,976	-				-0.2