Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1256c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,402,702 | + | -2.1 | |||
1,402,964 | + | Rv1255c | 0.31 | +0.2 | |
1,403,051 | - | Rv1255c | 0.45 | -2.7 | |
1,403,194 | - | Rv1255c | 0.68 | +0.6 | |
1,403,306 | - | Rv1255c | 0.87 | -0.0 | |
1,403,429 | + | +0.2 | |||
1,403,905 | + | Rv1256c | 0.43 | -0.5 | |
1,404,141 | - | Rv1256c | 0.62 | -1.1 | |
1,404,176 | - | Rv1256c | 0.65 | -1.6 | |
1,404,464 | + | Rv1256c | 0.89 | -0.5 | |
1,404,464 | + | Rv1256c | 0.89 | -0.2 | |
1,404,467 | + | Rv1256c | 0.89 | -0.5 | |
1,404,468 | - | Rv1256c | 0.89 | -0.8 | |
1,404,474 | - | Rv1256c | 0.89 | -2.2 | |
1,404,805 | + | +0.1 | |||
1,404,944 | - | Rv1257c | 0.17 | -0.4 | |
1,405,596 | + | Rv1257c | 0.64 | +1.0 | |
1,405,596 | + | Rv1257c | 0.64 | -0.8 | |
1,405,597 | - | Rv1257c | 0.64 | +0.1 | |
1,405,597 | - | Rv1257c | 0.64 | -2.6 | |
1,405,601 | - | Rv1257c | 0.65 | -0.3 |
Or see this region's nucleotide sequence