Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1204c

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
1,346,467	+		Rv1203c	0.25	-0.3
1,346,468	-		Rv1203c	0.25	-0.3
1,346,888	+				+1.9
1,346,889	-				-0.5
1,346,889	-				-0.1
1,346,889	-				-1.8
1,346,892	+				-0.0
1,346,892	+				+1.6
1,346,893	-				-0.4
1,346,938	-				-0.2
1,347,116	+		Rv1204c	0.11	+0.8
1,347,117	-		Rv1204c	0.11	-0.2
1,347,457	-		Rv1204c	0.31	-1.0
1,347,593	-		Rv1204c	0.39	-0.7
1,347,633	-		Rv1204c	0.41	-1.9
1,347,633	-		Rv1204c	0.41	+0.1
1,347,633	-		Rv1204c	0.41	-0.6
1,347,741	+		Rv1204c	0.48	-0.3
1,347,741	+		Rv1204c	0.48	+0.5
1,347,772	+		Rv1204c	0.49	-2.5
1,347,894	+		Rv1204c	0.57	+0.0
1,347,895	-		Rv1204c	0.57	-0.6
1,347,937	-		Rv1204c	0.59	-0.4
1,347,937	-		Rv1204c	0.59	-1.1
1,348,038	+		Rv1204c	0.65	-0.6
1,348,193	+		Rv1204c	0.74	-1.3
1,348,193	+		Rv1204c	0.74	+0.1
1,348,196	-		Rv1204c	0.75	-1.9
1,348,196	-		Rv1204c	0.75	-0.5
1,348,266	+		Rv1204c	0.79	-1.2
1,348,266	+		Rv1204c	0.79	-0.5
1,348,267	-		Rv1204c	0.79	-1.3
1,348,267	-		Rv1204c	0.79	-0.4
1,348,351	+		Rv1204c	0.84	+0.8
1,348,636	-				+0.7
1,348,685	-				+1.8
1,348,706	+				-0.4
1,348,706	+				+0.8
1,348,719	-				-1.0
1,348,719	-				+0.2
1,348,719	-				+1.5
1,348,764	+				-2.4
1,348,798	+		Rv1205	0.14	+1.8
1,348,798	+		Rv1205	0.14	-0.0
1,348,798	+		Rv1205	0.14	-0.1
1,349,021	+		Rv1205	0.54	-0.5
1,349,021	+		Rv1205	0.54	+1.8
1,349,074	+		Rv1205	0.63	+1.8
1,349,140	+		Rv1205	0.75	-0.1
1,349,202	+		Rv1205	0.86	+1.8
1,349,202	+		Rv1205	0.86	-0.0
1,349,203	-		Rv1205	0.86	+0.0
1,349,203	-		Rv1205	0.86	-0.4
1,349,203	-		Rv1205	0.86	-0.4
1,349,236	+				+0.3
1,349,330	-				+1.8
1,349,330	-				+0.5
1,349,330	-				-0.1
1,349,341	+				+1.8
1,349,342	-				+0.2