Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1004c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,120,009 | + | -0.7 | |||
1,120,010 | - | -0.2 | |||
1,120,360 | - | Rv1003 | 0.39 | -0.4 | |
1,120,878 | - | +0.3 | |||
1,120,878 | - | +0.1 | |||
1,120,890 | + | -0.7 | |||
1,120,897 | + | -0.8 | |||
1,120,897 | + | +1.3 | |||
1,120,897 | + | -0.9 | |||
1,120,898 | - | +0.7 | |||
1,121,547 | + | Rv1004c | 0.52 | +0.3 | |
1,121,547 | + | Rv1004c | 0.52 | -1.9 | |
1,121,726 | + | Rv1004c | 0.66 | -0.1 | |
1,121,726 | + | Rv1004c | 0.66 | -2.3 | |
1,122,114 | - | -0.9 |
Or see this region's nucleotide sequence