Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0928 and Rv0929 are separated by 12 nucleotides Rv0929 and Rv0930 overlap by 4 nucleotides Rv0930 and Rv0931c overlap by 6 nucleotides
Rv0928: Rv0928 - Periplasmic phosphate-binding lipoprotein PstS3 (PBP-3) (PstS3) (PHOS1), at 1,034,903 to 1,036,015
Rv0928
Rv0929: Rv0929 - Phosphate-transport integral membrane ABC transporter PstC2, at 1,036,028 to 1,037,002
Rv0929
Rv0930: Rv0930 - Probable phosphate-transport integral membrane ABC transporter PstA1, at 1,036,999 to 1,037,925
Rv0930
Rv0931c: Rv0931c - Transmembrane serine/threonine-protein kinase D PknD (protein kinase D) (STPK D), at 1,037,920 to 1,039,914
Rv0931c
Position (kb)
1036
1037
1038 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1035.144 kb on - strand, within Rv0928 at 1035.312 kb on - strand, within Rv0928 at 1035.382 kb on + strand, within Rv0928 at 1035.382 kb on + strand, within Rv0928 at 1035.500 kb on + strand, within Rv0928 at 1035.532 kb on + strand, within Rv0928 at 1035.633 kb on - strand, within Rv0928 at 1035.954 kb on - strand at 1036.364 kb on + strand, within Rv0929 at 1036.364 kb on + strand, within Rv0929 at 1036.617 kb on + strand, within Rv0929 at 1036.675 kb on - strand, within Rv0929 at 1036.719 kb on - strand, within Rv0929 at 1036.850 kb on - strand, within Rv0929 at 1036.914 kb on - strand at 1036.914 kb on - strand at 1037.065 kb on - strand at 1037.254 kb on + strand, within Rv0930 at 1037.255 kb on - strand, within Rv0930 at 1037.266 kb on + strand, within Rv0930 at 1037.335 kb on + strand, within Rv0930 at 1037.335 kb on + strand, within Rv0930 at 1037.336 kb on - strand, within Rv0930 at 1037.377 kb on - strand, within Rv0930 at 1037.412 kb on + strand, within Rv0930 at 1037.427 kb on - strand, within Rv0930 at 1037.779 kb on + strand, within Rv0930 at 1037.780 kb on - strand, within Rv0930 at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 1,035,144 - Rv0928 0.22 +0.7 1,035,312 - Rv0928 0.37 -3.2 1,035,382 + Rv0928 0.43 -2.1 1,035,382 + Rv0928 0.43 -1.5 1,035,500 + Rv0928 0.54 -1.2 1,035,532 + Rv0928 0.57 -0.6 1,035,633 - Rv0928 0.66 -0.7 1,035,954 - +1.7 1,036,364 + Rv0929 0.34 -2.3 1,036,364 + Rv0929 0.34 -0.9 1,036,617 + Rv0929 0.60 -2.1 1,036,675 - Rv0929 0.66 -0.9 1,036,719 - Rv0929 0.71 -0.9 1,036,850 - Rv0929 0.84 -1.8 1,036,914 - -1.6 1,036,914 - +0.4 1,037,065 - -1.8 1,037,254 + Rv0930 0.28 -2.9 1,037,255 - Rv0930 0.28 -2.8 1,037,266 + Rv0930 0.29 -2.8 1,037,335 + Rv0930 0.36 -3.5 1,037,335 + Rv0930 0.36 -2.0 1,037,336 - Rv0930 0.36 -1.9 1,037,377 - Rv0930 0.41 -3.6 1,037,412 + Rv0930 0.45 -1.3 1,037,427 - Rv0930 0.46 +0.7 1,037,779 + Rv0930 0.84 -2.7 1,037,780 - Rv0930 0.84 -2.2 1,037,966 + -0.3 1,037,966 + -1.0 1,037,966 + +0.1
Or see this region's nucleotide sequence