Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0548c and Rv0549c are separated by 271 nucleotides Rv0549c and Rv0550c overlap by 4 nucleotides Rv0550c and Rv0551c are separated by 191 nucleotides
Rv0548c: Rv0548c - Naphthoate synthase MenB (dihydroxynaphthoic acid synthetase) (DHNA synthetase), at 639,012 to 639,956
Rv0548c
Rv0549c: Rv0549c - Possible toxin VapC3, at 640,228 to 640,641
Rv0549c
Rv0550c: Rv0550c - Possible antitoxin VapB3, at 640,638 to 640,904
Rv0550c
Rv0551c: Rv0551c - Probable fatty-acid-CoA ligase FadD8 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase), at 641,096 to 642,811
Rv0551c
Position (kb) 640
641 Strain fitness (log2 ratio) -2
-1
0
1
2 at 639.992 kb on - strand at 640.023 kb on - strand at 640.178 kb on + strand at 640.179 kb on - strand at 640.179 kb on - strand at 640.436 kb on + strand, within Rv0549c at 640.437 kb on - strand, within Rv0549c at 640.576 kb on + strand, within Rv0549c at 640.837 kb on + strand, within Rv0550c at 640.838 kb on - strand, within Rv0550c at 641.049 kb on - strand at 641.049 kb on - strand at 641.162 kb on + strand at 641.163 kb on - strand at 641.463 kb on + strand, within Rv0551c at 641.463 kb on + strand, within Rv0551c at 641.463 kb on + strand, within Rv0551c at 641.464 kb on - strand, within Rv0551c at 641.466 kb on + strand, within Rv0551c at 641.466 kb on + strand, within Rv0551c at 641.467 kb on - strand, within Rv0551c at 641.467 kb on - strand, within Rv0551c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 639,992 - +0.8 640,023 - -1.9 640,178 + -0.6 640,179 - -1.0 640,179 - -0.4 640,436 + Rv0549c 0.50 -1.5 640,437 - Rv0549c 0.50 -0.0 640,576 + Rv0549c 0.84 -1.6 640,837 + Rv0550c 0.75 -0.6 640,838 - Rv0550c 0.75 +0.8 641,049 - -0.8 641,049 - -0.2 641,162 + +0.4 641,163 - -1.0 641,463 + Rv0551c 0.21 -0.4 641,463 + Rv0551c 0.21 -1.9 641,463 + Rv0551c 0.21 -1.0 641,464 - Rv0551c 0.21 +0.8 641,466 + Rv0551c 0.22 -0.7 641,466 + Rv0551c 0.22 +0.0 641,467 - Rv0551c 0.22 -1.2 641,467 - Rv0551c 0.22 +2.6
Or see this region's nucleotide sequence