Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0153c and Rv0154c are separated by 1 nucleotides Rv0154c and Rv0155 are separated by 423 nucleotides
Rv0153c: Rv0153c - Phosphotyrosine protein phosphatase PTPB (protein-tyrosine-phosphatase) (PTPase), at 181,155 to 181,985
Rv0153c
Rv0154c: Rv0154c - Probable acyl-CoA dehydrogenase FadE2, at 181,987 to 183,198
Rv0154c
Rv0155: Rv0155 - Probable NAD(P) transhydrogenase (subunit alpha) PntAa [first part; catalytic part] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha), at 183,622 to 184,722
Rv0155
Position (kb) 181
182
183
184 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 180.998 kb on - strand at 181.237 kb on + strand at 181.274 kb on - strand, within Rv0153c at 181.597 kb on + strand, within Rv0153c at 182.103 kb on - strand at 182.718 kb on + strand, within Rv0154c at 182.736 kb on - strand, within Rv0154c at 182.736 kb on - strand, within Rv0154c at 182.736 kb on - strand, within Rv0154c at 183.019 kb on + strand, within Rv0154c at 183.020 kb on - strand, within Rv0154c at 183.020 kb on - strand, within Rv0154c at 183.020 kb on - strand, within Rv0154c at 183.110 kb on + strand at 183.221 kb on + strand at 183.221 kb on + strand at 183.222 kb on - strand at 183.225 kb on + strand at 183.225 kb on + strand at 183.245 kb on + strand at 183.246 kb on - strand at 183.246 kb on - strand at 183.246 kb on - strand at 183.246 kb on - strand at 183.246 kb on - strand at 183.345 kb on + strand at 183.345 kb on + strand at 183.346 kb on - strand at 183.406 kb on - strand at 183.508 kb on + strand at 183.509 kb on - strand at 183.549 kb on - strand at 183.549 kb on - strand at 183.599 kb on + strand at 183.600 kb on - strand at 183.615 kb on - strand at 183.925 kb on - strand, within Rv0155 at 184.051 kb on + strand, within Rv0155 at 184.051 kb on + strand, within Rv0155 at 184.054 kb on - strand, within Rv0155 at 184.054 kb on - strand, within Rv0155
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 180,998 - +0.9 181,237 + -2.0 181,274 - Rv0153c 0.14 -1.9 181,597 + Rv0153c 0.53 -0.9 182,103 - +0.5 182,718 + Rv0154c 0.60 -1.6 182,736 - Rv0154c 0.62 +0.5 182,736 - Rv0154c 0.62 -0.7 182,736 - Rv0154c 0.62 -0.4 183,019 + Rv0154c 0.85 -2.1 183,020 - Rv0154c 0.85 -0.4 183,020 - Rv0154c 0.85 -0.6 183,020 - Rv0154c 0.85 -1.1 183,110 + -0.5 183,221 + -0.2 183,221 + -0.3 183,222 - +0.5 183,225 + -0.7 183,225 + -0.7 183,245 + -1.3 183,246 - -0.8 183,246 - -3.6 183,246 - +0.5 183,246 - +1.5 183,246 - -0.4 183,345 + +0.1 183,345 + -0.8 183,346 - -0.8 183,406 - -0.2 183,508 + -0.4 183,509 - -0.7 183,549 - -0.7 183,549 - +0.7 183,599 + -1.1 183,600 - -0.2 183,615 - +1.7 183,925 - Rv0155 0.28 -1.8 184,051 + Rv0155 0.39 -0.1 184,051 + Rv0155 0.39 +0.0 184,054 - Rv0155 0.39 -1.0 184,054 - Rv0155 0.39 -1.3
Or see this region's nucleotide sequence