Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0119 and Rv0120c are separated by 0 nucleotides Rv0120c and Rv0121c are separated by 136 nucleotides Rv0121c and Rv0122 are separated by 148 nucleotides
Rv0119: Rv0119 - Probable fatty-acid-CoA ligase FadD7 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase), at 144,049 to 145,626
Rv0119
Rv0120c: Rv0120c - Probable elongation factor G FusA2 (EF-G), at 145,627 to 147,771
Rv0120c
Rv0121c: Rv0121c - Conserved protein, at 147,908 to 148,342
Rv0121c
Rv0122: Rv0122 - Hypothetical protein, at 148,491 to 148,859
Rv0122
Position (kb) 145
146
147
148 Strain fitness (log2 ratio) -1
0
1 at 145.624 kb on + strand at 145.628 kb on + strand at 145.874 kb on - strand, within Rv0120c at 146.350 kb on - strand, within Rv0120c at 146.685 kb on + strand, within Rv0120c at 146.686 kb on - strand, within Rv0120c at 146.686 kb on - strand, within Rv0120c at 146.688 kb on + strand, within Rv0120c at 146.881 kb on - strand, within Rv0120c at 147.197 kb on + strand, within Rv0120c at 147.245 kb on + strand, within Rv0120c at 147.245 kb on + strand, within Rv0120c at 147.253 kb on + strand, within Rv0120c at 147.479 kb on + strand, within Rv0120c at 147.825 kb on + strand at 147.826 kb on - strand at 148.095 kb on + strand, within Rv0121c at 148.353 kb on + strand at 148.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 145,624 + -0.6 145,628 + +0.2 145,874 - Rv0120c 0.12 +0.1 146,350 - Rv0120c 0.34 +0.6 146,685 + Rv0120c 0.49 -0.4 146,686 - Rv0120c 0.49 +0.2 146,686 - Rv0120c 0.49 -0.2 146,688 + Rv0120c 0.49 -0.5 146,881 - Rv0120c 0.58 -0.6 147,197 + Rv0120c 0.73 -0.1 147,245 + Rv0120c 0.75 -0.2 147,245 + Rv0120c 0.75 -0.6 147,253 + Rv0120c 0.76 +1.6 147,479 + Rv0120c 0.86 +0.9 147,825 + -0.8 147,826 - -1.6 148,095 + Rv0121c 0.43 +0.3 148,353 + +0.1 148,353 + +0.3
Or see this region's nucleotide sequence