Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0926c and Rv0927c are separated by 53 nucleotides Rv0927c and Rv0928 are separated by 271 nucleotides
Rv0926c: Rv0926c - Conserved hypothetical protein, at 1,032,710 to 1,033,786
Rv0926c
Rv0927c: Rv0927c - Probable short-chain type dehydrogenase/reductase, at 1,033,840 to 1,034,631
Rv0927c
Rv0928: Rv0928 - Periplasmic phosphate-binding lipoprotein PstS3 (PBP-3) (PstS3) (PHOS1), at 1,034,903 to 1,036,015
Rv0928
Position (kb)
1033
1034
1035 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1032.885 kb on + strand, within Rv0926c at 1032.886 kb on - strand, within Rv0926c at 1032.956 kb on + strand, within Rv0926c at 1033.060 kb on + strand, within Rv0926c at 1033.257 kb on - strand, within Rv0926c at 1033.301 kb on + strand, within Rv0926c at 1033.302 kb on - strand, within Rv0926c at 1033.489 kb on + strand, within Rv0926c at 1033.518 kb on + strand, within Rv0926c at 1033.563 kb on + strand, within Rv0926c at 1033.940 kb on + strand, within Rv0927c at 1034.153 kb on + strand, within Rv0927c at 1034.665 kb on + strand at 1034.726 kb on - strand at 1034.737 kb on - strand at 1034.853 kb on + strand at 1035.144 kb on - strand, within Rv0928 at 1035.312 kb on - strand, within Rv0928 at 1035.382 kb on + strand, within Rv0928 at 1035.382 kb on + strand, within Rv0928 at 1035.500 kb on + strand, within Rv0928 at 1035.532 kb on + strand, within Rv0928
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,032,885 + Rv0926c 0.16 -0.5 1,032,886 - Rv0926c 0.16 +0.1 1,032,956 + Rv0926c 0.23 -0.6 1,033,060 + Rv0926c 0.32 -1.7 1,033,257 - Rv0926c 0.51 +2.1 1,033,301 + Rv0926c 0.55 -0.2 1,033,302 - Rv0926c 0.55 +0.4 1,033,489 + Rv0926c 0.72 -0.5 1,033,518 + Rv0926c 0.75 +0.9 1,033,563 + Rv0926c 0.79 -2.0 1,033,940 + Rv0927c 0.13 -1.3 1,034,153 + Rv0927c 0.40 +1.4 1,034,665 + -0.6 1,034,726 - -0.2 1,034,737 - -0.5 1,034,853 + +0.2 1,035,144 - Rv0928 0.22 +0.1 1,035,312 - Rv0928 0.37 -1.5 1,035,382 + Rv0928 0.43 -1.7 1,035,382 + Rv0928 0.43 -0.0 1,035,500 + Rv0928 0.54 -2.4 1,035,532 + Rv0928 0.57 -0.2
Or see this region's nucleotide sequence