Experiment: MoLS4 without Thiamine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0452 and DVU0453 are separated by 429 nucleotides DVU0453 and DVU0454 are separated by 110 nucleotides DVU0454 and DVU0455 are separated by 49 nucleotides
DVU0452: DVU0452 - hypothetical protein (TIGR), at 517,716 to 518,939
DVU0452
DVU0453: DVU0453 - ATP-dependent DNA helicase, UvrD/REP family (TIGR), at 519,369 to 522,752
DVU0453
DVU0454: DVU0454 - hypothetical protein (TIGR), at 522,863 to 523,111
DVU0454
DVU0455: DVU0455 - hypothetical protein (TIGR), at 523,161 to 523,928
DVU0455
Position (kb) 519
520
521
522
523 Strain fitness (log2 ratio) -1
0
1 at 518.406 kb on - strand, within DVU0452 at 518.444 kb on + strand, within DVU0452 at 518.473 kb on + strand, within DVU0452 at 518.563 kb on + strand, within DVU0452 at 518.618 kb on - strand, within DVU0452 at 518.622 kb on + strand, within DVU0452 at 518.625 kb on - strand, within DVU0452 at 518.660 kb on + strand, within DVU0452 at 518.668 kb on - strand, within DVU0452 at 518.939 kb on - strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.942 kb on + strand at 518.969 kb on - strand at 519.045 kb on - strand at 519.086 kb on + strand at 519.147 kb on - strand at 519.152 kb on + strand at 519.181 kb on - strand at 519.319 kb on - strand at 519.344 kb on - strand at 519.377 kb on + strand at 519.409 kb on + strand at 519.409 kb on + strand at 519.409 kb on + strand at 519.479 kb on - strand at 519.707 kb on - strand at 519.707 kb on - strand at 519.709 kb on - strand, within DVU0453 at 519.796 kb on + strand, within DVU0453 at 519.833 kb on + strand, within DVU0453 at 519.872 kb on + strand, within DVU0453 at 520.172 kb on + strand, within DVU0453 at 520.172 kb on - strand, within DVU0453 at 520.180 kb on - strand, within DVU0453 at 520.201 kb on - strand, within DVU0453 at 520.224 kb on + strand, within DVU0453 at 520.224 kb on + strand, within DVU0453 at 520.299 kb on - strand, within DVU0453 at 520.336 kb on + strand, within DVU0453 at 520.344 kb on - strand, within DVU0453 at 520.344 kb on - strand, within DVU0453 at 520.344 kb on - strand, within DVU0453 at 520.344 kb on - strand, within DVU0453 at 520.479 kb on - strand, within DVU0453 at 520.543 kb on - strand, within DVU0453 at 520.666 kb on - strand, within DVU0453 at 520.713 kb on + strand, within DVU0453 at 520.729 kb on - strand, within DVU0453 at 520.776 kb on - strand, within DVU0453 at 520.908 kb on + strand, within DVU0453 at 520.958 kb on + strand, within DVU0453 at 521.025 kb on + strand, within DVU0453 at 521.040 kb on + strand, within DVU0453 at 521.067 kb on + strand, within DVU0453 at 521.075 kb on - strand, within DVU0453 at 521.075 kb on - strand, within DVU0453 at 521.089 kb on + strand, within DVU0453 at 521.177 kb on - strand, within DVU0453 at 521.188 kb on + strand, within DVU0453 at 521.194 kb on - strand, within DVU0453 at 521.206 kb on - strand, within DVU0453 at 521.315 kb on - strand, within DVU0453 at 521.337 kb on - strand, within DVU0453 at 521.371 kb on + strand, within DVU0453 at 521.399 kb on + strand, within DVU0453 at 521.407 kb on + strand, within DVU0453 at 521.415 kb on - strand, within DVU0453 at 521.424 kb on + strand, within DVU0453 at 521.621 kb on + strand, within DVU0453 at 521.658 kb on + strand, within DVU0453 at 521.868 kb on + strand, within DVU0453 at 521.878 kb on - strand, within DVU0453 at 521.878 kb on - strand, within DVU0453 at 521.922 kb on - strand, within DVU0453 at 521.946 kb on + strand, within DVU0453 at 522.086 kb on + strand, within DVU0453 at 522.086 kb on + strand, within DVU0453 at 522.116 kb on - strand, within DVU0453 at 522.263 kb on + strand, within DVU0453 at 522.288 kb on + strand, within DVU0453 at 522.312 kb on + strand, within DVU0453 at 522.331 kb on - strand, within DVU0453 at 522.390 kb on + strand, within DVU0453 at 522.468 kb on - strand at 522.499 kb on - strand at 522.551 kb on + strand at 522.561 kb on + strand at 522.561 kb on + strand at 522.569 kb on - strand at 522.623 kb on - strand at 522.690 kb on + strand at 522.723 kb on - strand at 522.763 kb on + strand at 522.771 kb on - strand at 522.787 kb on + strand at 522.862 kb on - strand at 522.862 kb on - strand at 522.862 kb on - strand at 522.934 kb on - strand, within DVU0454 at 522.967 kb on - strand, within DVU0454 at 522.972 kb on - strand, within DVU0454 at 523.022 kb on - strand, within DVU0454 at 523.022 kb on - strand, within DVU0454 at 523.159 kb on - strand at 523.159 kb on - strand at 523.161 kb on - strand at 523.166 kb on - strand at 523.198 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.406 kb on + strand, within DVU0455 at 523.493 kb on - strand, within DVU0455 at 523.505 kb on - strand, within DVU0455 at 523.507 kb on - strand, within DVU0455 at 523.577 kb on + strand, within DVU0455 at 523.629 kb on - strand, within DVU0455 at 523.676 kb on + strand, within DVU0455 at 523.676 kb on + strand, within DVU0455 at 523.715 kb on + strand, within DVU0455
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Thiamine remove 518,406 - DVU0452 0.56 +0.8 518,444 + DVU0452 0.59 +0.7 518,473 + DVU0452 0.62 +0.1 518,563 + DVU0452 0.69 +0.8 518,618 - DVU0452 0.74 +0.2 518,622 + DVU0452 0.74 +1.2 518,625 - DVU0452 0.74 +0.0 518,660 + DVU0452 0.77 -1.0 518,668 - DVU0452 0.78 -0.4 518,939 - +0.2 518,941 + -0.1 518,941 + -0.3 518,941 + -1.6 518,941 + +0.3 518,942 + +0.1 518,969 - -0.5 519,045 - -0.2 519,086 + +0.2 519,147 - -0.5 519,152 + +0.2 519,181 - -0.2 519,319 - -0.1 519,344 - -0.5 519,377 + +0.5 519,409 + +0.3 519,409 + -0.5 519,409 + +0.1 519,479 - +0.1 519,707 - -0.4 519,707 - +0.1 519,709 - DVU0453 0.10 +0.1 519,796 + DVU0453 0.13 +0.0 519,833 + DVU0453 0.14 +0.2 519,872 + DVU0453 0.15 +0.0 520,172 + DVU0453 0.24 -0.1 520,172 - DVU0453 0.24 +0.1 520,180 - DVU0453 0.24 +0.4 520,201 - DVU0453 0.25 -0.3 520,224 + DVU0453 0.25 +0.4 520,224 + DVU0453 0.25 -0.6 520,299 - DVU0453 0.27 +0.2 520,336 + DVU0453 0.29 -0.8 520,344 - DVU0453 0.29 -0.1 520,344 - DVU0453 0.29 +0.1 520,344 - DVU0453 0.29 +0.2 520,344 - DVU0453 0.29 -0.2 520,479 - DVU0453 0.33 +0.1 520,543 - DVU0453 0.35 -0.1 520,666 - DVU0453 0.38 +0.6 520,713 + DVU0453 0.40 -0.5 520,729 - DVU0453 0.40 -0.2 520,776 - DVU0453 0.42 -1.1 520,908 + DVU0453 0.45 -0.4 520,958 + DVU0453 0.47 -0.2 521,025 + DVU0453 0.49 -0.1 521,040 + DVU0453 0.49 -0.0 521,067 + DVU0453 0.50 -1.1 521,075 - DVU0453 0.50 -0.5 521,075 - DVU0453 0.50 -1.1 521,089 + DVU0453 0.51 +0.2 521,177 - DVU0453 0.53 -0.0 521,188 + DVU0453 0.54 -0.3 521,194 - DVU0453 0.54 -0.2 521,206 - DVU0453 0.54 -0.1 521,315 - DVU0453 0.58 -0.8 521,337 - DVU0453 0.58 -0.4 521,371 + DVU0453 0.59 -0.1 521,399 + DVU0453 0.60 -0.1 521,407 + DVU0453 0.60 +0.1 521,415 - DVU0453 0.60 -0.0 521,424 + DVU0453 0.61 -0.8 521,621 + DVU0453 0.67 -0.2 521,658 + DVU0453 0.68 -1.3 521,868 + DVU0453 0.74 -0.2 521,878 - DVU0453 0.74 +1.3 521,878 - DVU0453 0.74 -0.8 521,922 - DVU0453 0.75 -1.6 521,946 + DVU0453 0.76 -1.3 522,086 + DVU0453 0.80 -0.1 522,086 + DVU0453 0.80 +0.7 522,116 - DVU0453 0.81 +0.3 522,263 + DVU0453 0.86 -0.8 522,288 + DVU0453 0.86 -0.1 522,312 + DVU0453 0.87 +0.2 522,331 - DVU0453 0.88 -1.1 522,390 + DVU0453 0.89 -0.0 522,468 - +0.1 522,499 - -0.8 522,551 + -0.5 522,561 + -0.2 522,561 + -1.0 522,569 - +0.6 522,623 - +0.0 522,690 + -0.0 522,723 - +0.4 522,763 + -0.1 522,771 - -0.3 522,787 + -0.5 522,862 - +0.2 522,862 - +0.0 522,862 - +1.0 522,934 - DVU0454 0.29 -0.5 522,967 - DVU0454 0.42 -0.1 522,972 - DVU0454 0.44 -0.6 523,022 - DVU0454 0.64 +0.4 523,022 - DVU0454 0.64 -0.4 523,159 - -0.0 523,159 - +0.1 523,161 - -0.5 523,166 - -0.6 523,198 - -0.4 523,210 - -0.7 523,210 - -0.3 523,210 - -0.5 523,210 - +1.2 523,406 + DVU0455 0.32 +0.3 523,493 - DVU0455 0.43 -1.4 523,505 - DVU0455 0.45 -1.2 523,507 - DVU0455 0.45 -1.0 523,577 + DVU0455 0.54 +0.1 523,629 - DVU0455 0.61 -0.1 523,676 + DVU0455 0.67 -0.4 523,676 + DVU0455 0.67 -0.7 523,715 + DVU0455 0.72 -1.6
Or see this region's nucleotide sequence