Strain Fitness in Erwinia tracheiphila HP pepo 2.2 around IJEDHG_24410

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
4,216,597	+				-0.4
4,216,598	-				-1.9
4,216,598	-				-0.4
4,216,640	-	motB	IJEDHG_24405	0.12	-0.1
4,216,673	+	motB	IJEDHG_24405	0.15	+0.3
4,216,854	-	motB	IJEDHG_24405	0.32	-0.9
4,216,959	+	motB	IJEDHG_24405	0.42	-0.9
4,217,003	+	motB	IJEDHG_24405	0.46	+0.5
4,217,003	+	motB	IJEDHG_24405	0.46	+1.2
4,217,049	+	motB	IJEDHG_24405	0.51	-0.3
4,217,049	+	motB	IJEDHG_24405	0.51	-0.2
4,217,050	-	motB	IJEDHG_24405	0.51	-0.3
4,217,117	+	motB	IJEDHG_24405	0.57	-0.6
4,217,184	-	motB	IJEDHG_24405	0.64	+0.5
4,217,335	+	motB	IJEDHG_24405	0.78	+2.0
4,217,473	-				+1.5
4,217,473	-				-0.8
4,217,540	-				+1.7
4,217,551	+				+1.5
4,217,788	-	motA	IJEDHG_24410	0.26	-1.5
4,217,788	-	motA	IJEDHG_24410	0.26	+0.2
4,217,825	-	motA	IJEDHG_24410	0.30	-0.0
4,217,886	+	motA	IJEDHG_24410	0.37	-0.5
4,218,055	+	motA	IJEDHG_24410	0.56	-2.1
4,218,055	+	motA	IJEDHG_24410	0.56	-0.4
4,218,060	-	motA	IJEDHG_24410	0.57	+0.3
4,218,221	+	motA	IJEDHG_24410	0.75	+1.7
4,218,222	-	motA	IJEDHG_24410	0.75	-0.2
4,218,222	-	motA	IJEDHG_24410	0.75	+1.0
4,218,235	-	motA	IJEDHG_24410	0.76	-0.7
4,218,236	+	motA	IJEDHG_24410	0.76	-0.0
4,218,236	+	motA	IJEDHG_24410	0.76	-0.6
4,218,236	+	motA	IJEDHG_24410	0.76	+1.2
4,218,237	-	motA	IJEDHG_24410	0.77	+3.3
4,218,336	+	motA	IJEDHG_24410	0.88	+0.6
4,218,401	-				-0.4
4,218,425	+				-0.8
4,218,436	-				-0.9
4,218,455	+				-0.5
4,218,638	+	flhC	IJEDHG_24415	0.11	+0.8
4,218,867	-	flhC	IJEDHG_24415	0.50	+0.2
4,218,944	+	flhC	IJEDHG_24415	0.64	+1.3
4,218,996	-	flhC	IJEDHG_24415	0.73	-0.3
4,219,024	+	flhC	IJEDHG_24415	0.77	+0.6
4,219,025	-	flhC	IJEDHG_24415	0.78	-0.2
4,219,025	-	flhC	IJEDHG_24415	0.78	+1.2
4,219,025	-	flhC	IJEDHG_24415	0.78	-1.4
4,219,098	+				-0.7
4,219,099	-				-0.9
4,219,208	+	flhD	IJEDHG_24420	0.15	+0.6
4,219,208	+	flhD	IJEDHG_24420	0.15	+0.7