Strain Fitness in Erwinia tracheiphila HP pepo 2.2 around IJEDHG_09565

Experiment: plant=Cucumber; plant sample=CP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP2; plant location=NA
1,581,768	+				-0.7
1,581,812	+				-2.2
1,582,598	+				-0.9
1,583,432	+				+1.5
1,583,432	+				-0.8
1,583,433	-				-1.2
1,583,513	+				+0.3
1,583,513	+				-0.9
1,583,514	-				+0.7
1,583,538	+				-1.7
1,583,538	+				+0.2
1,583,683	+				-1.4
1,583,684	-				+1.5
1,583,709	+				+0.1