Strain Fitness in Erwinia tracheiphila HP pepo 2.2 around IJEDHG_02630

Experiment: plant=Cucumber; plant sample=CP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP2; plant location=NA
366,165	+		IJEDHG_02625	0.64	+0.8
366,531	+				-1.8
366,620	+				+0.2
366,672	-				-1.3
366,675	-				-0.1
366,675	-				+0.5
366,782	-				-0.3
366,930	-				+1.3
367,007	-				+2.1
367,018	-				+0.7
367,049	+				+0.2
367,054	+				+0.1
367,054	+				+0.1
367,083	-				+1.1
367,083	-				-0.4
367,086	+				-1.3
368,582	+				+0.5
368,583	-				-0.8
368,603	+				+0.8
368,603	+				-1.9
368,603	+				+0.4
368,603	+				-0.1
368,604	-				+0.7
368,606	-				-0.4
368,606	-				+3.1
368,623	+				+1.2
368,623	+				-0.2
368,624	-				+0.4
368,657	-		IJEDHG_02635	0.13	-0.7
368,657	-		IJEDHG_02635	0.13	-0.9
368,785	-		IJEDHG_02635	0.47	+0.4
368,911	+		IJEDHG_02635	0.80	-0.9
368,936	-		IJEDHG_02635	0.87	-2.5
368,982	+				+0.3
369,004	-				-1.8
369,004	-				-0.6
369,030	-				-0.9
369,073	+				+2.1
369,074	-				-0.3
369,074	-				+1.5
369,118	-				+1.9
369,118	-				+0.3
369,263	+		IJEDHG_02640	0.13	+0.3
369,264	-		IJEDHG_02640	0.13	-0.7
369,264	-		IJEDHG_02640	0.13	+0.3
369,368	+		IJEDHG_02640	0.22	-0.1
369,369	-		IJEDHG_02640	0.22	+0.3