Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS13220

Experiment: Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate
2,805,133	-				-0.4
2,805,146	+				-0.2
2,805,147	-				-0.9
2,805,220	+				-1.3
2,805,220	+				-0.4
2,805,221	-				-0.1
2,805,221	-				-1.9
2,805,221	-				-0.4
2,805,434	+				-1.1
2,805,434	+				+1.3
2,805,434	+				-0.1
2,805,434	+				-1.6
2,805,434	+				-0.3
2,805,435	-				+0.8
2,805,435	-				-2.7
2,805,435	-				-1.9
2,805,435	-				+0.5
2,805,435	-				-2.2
2,805,435	-				+0.0
2,805,435	-				-0.1
2,805,466	-				-2.0
2,805,466	-				-0.5
2,805,470	+				-1.7
2,805,470	+				-1.5
2,805,471	-				-0.4
2,805,496	+				-0.6
2,805,496	+				-1.7
2,805,496	+				-1.5
2,805,496	+				-0.9
2,805,496	+				-0.4
2,805,497	-				-1.0
2,805,514	+				-0.7
2,805,514	+				+0.3
2,805,597	+				-0.6
2,805,597	+				+1.9
2,805,597	+				+1.9
2,806,038	+		ABCV34_RS13220	0.20	-0.1
2,806,038	+		ABCV34_RS13220	0.20	-2.0
2,806,039	-		ABCV34_RS13220	0.20	-0.1
2,806,039	-		ABCV34_RS13220	0.20	+0.6
2,806,039	-		ABCV34_RS13220	0.20	+0.3
2,806,039	-		ABCV34_RS13220	0.20	-1.7
2,806,039	-		ABCV34_RS13220	0.20	-0.3
2,806,039	-		ABCV34_RS13220	0.20	-1.4
2,806,227	+		ABCV34_RS13220	0.27	+0.9
2,806,227	+		ABCV34_RS13220	0.27	-0.9
2,806,227	+		ABCV34_RS13220	0.27	-2.3
2,806,227	+		ABCV34_RS13220	0.27	+0.9
2,806,228	-		ABCV34_RS13220	0.27	-1.1
2,806,228	-		ABCV34_RS13220	0.27	-3.1
2,806,228	-		ABCV34_RS13220	0.27	+1.9
2,806,228	-		ABCV34_RS13220	0.27	-1.4
2,806,228	-		ABCV34_RS13220	0.27	-1.1
2,806,228	-		ABCV34_RS13220	0.27	-0.4
2,806,228	-		ABCV34_RS13220	0.27	+1.9
2,806,254	+		ABCV34_RS13220	0.28	-3.1
2,806,254	+		ABCV34_RS13220	0.28	+1.2
2,806,254	+		ABCV34_RS13220	0.28	-0.1
2,806,254	+		ABCV34_RS13220	0.28	-0.4
2,806,254	+		ABCV34_RS13220	0.28	+0.5
2,806,255	-		ABCV34_RS13220	0.28	+1.3
2,806,255	-		ABCV34_RS13220	0.28	+1.9
2,806,512	+		ABCV34_RS13220	0.38	-1.8
2,806,512	+		ABCV34_RS13220	0.38	-0.4
2,806,512	+		ABCV34_RS13220	0.38	+1.9
2,806,512	+		ABCV34_RS13220	0.38	-2.6
2,806,513	-		ABCV34_RS13220	0.38	+0.9
2,806,513	-		ABCV34_RS13220	0.38	-0.1
2,806,876	+		ABCV34_RS13220	0.52	+1.9
2,806,876	+		ABCV34_RS13220	0.52	+1.9
2,806,876	+		ABCV34_RS13220	0.52	-1.9
2,806,876	+		ABCV34_RS13220	0.52	-0.4
2,806,877	-		ABCV34_RS13220	0.52	-1.1
2,806,877	-		ABCV34_RS13220	0.52	+0.3
2,806,877	-		ABCV34_RS13220	0.52	-0.1
2,807,080	+		ABCV34_RS13220	0.60	-2.3
2,807,394	+		ABCV34_RS13220	0.72	-0.9
2,807,394	+		ABCV34_RS13220	0.72	-2.5
2,807,395	-		ABCV34_RS13220	0.72	-1.4
2,807,427	+		ABCV34_RS13220	0.73	+1.9
2,807,427	+		ABCV34_RS13220	0.73	+0.1
2,807,427	+		ABCV34_RS13220	0.73	-0.3
2,807,427	+		ABCV34_RS13220	0.73	-0.8
2,807,427	+		ABCV34_RS13220	0.73	-1.2
2,807,427	+		ABCV34_RS13220	0.73	-0.7
2,807,428	-		ABCV34_RS13220	0.73	-0.2
2,807,428	-		ABCV34_RS13220	0.73	-0.7
2,807,428	-		ABCV34_RS13220	0.73	-0.4
2,807,428	-		ABCV34_RS13220	0.73	-0.7
2,807,508	+		ABCV34_RS13220	0.76	-0.1
2,807,508	+		ABCV34_RS13220	0.76	-2.2
2,807,508	+		ABCV34_RS13220	0.76	+1.1
2,807,508	+		ABCV34_RS13220	0.76	-2.3
2,807,509	-		ABCV34_RS13220	0.76	+1.9
2,807,509	-		ABCV34_RS13220	0.76	+1.9
2,807,509	-		ABCV34_RS13220	0.76	-0.7
2,807,509	-		ABCV34_RS13220	0.76	-1.4
2,807,509	-		ABCV34_RS13220	0.76	-0.3
2,807,574	-		ABCV34_RS13220	0.79	-0.8
2,807,693	+		ABCV34_RS13220	0.83	-2.5
2,807,693	+		ABCV34_RS13220	0.83	-0.9
2,807,727	+		ABCV34_RS13220	0.84	+0.6
2,807,727	+		ABCV34_RS13220	0.84	-1.3
2,807,727	+		ABCV34_RS13220	0.84	-0.3
2,807,727	+		ABCV34_RS13220	0.84	-1.6
2,807,727	+		ABCV34_RS13220	0.84	-1.9
2,807,727	+		ABCV34_RS13220	0.84	-0.7
2,807,727	+		ABCV34_RS13220	0.84	+1.9
2,807,727	+		ABCV34_RS13220	0.84	-0.5
2,807,727	+		ABCV34_RS13220	0.84	-1.8
2,807,727	+		ABCV34_RS13220	0.84	-0.7
2,807,727	+		ABCV34_RS13220	0.84	-0.9
2,807,727	+		ABCV34_RS13220	0.84	-2.3
2,807,727	+		ABCV34_RS13220	0.84	-0.7
2,807,727	+		ABCV34_RS13220	0.84	-0.6
2,807,728	-		ABCV34_RS13220	0.84	-1.1
2,807,728	-		ABCV34_RS13220	0.84	+0.0
2,807,728	-		ABCV34_RS13220	0.84	-0.7
2,807,728	-		ABCV34_RS13220	0.84	-0.7
2,807,728	-		ABCV34_RS13220	0.84	-1.5
2,807,728	-		ABCV34_RS13220	0.84	-1.4
2,807,728	-		ABCV34_RS13220	0.84	-1.3
2,807,728	-		ABCV34_RS13220	0.84	-2.3
2,807,728	-		ABCV34_RS13220	0.84	-1.8
2,807,728	-		ABCV34_RS13220	0.84	-1.8
2,807,728	-		ABCV34_RS13220	0.84	+0.3
2,807,728	-		ABCV34_RS13220	0.84	-1.7
2,807,728	-		ABCV34_RS13220	0.84	-0.8
2,807,728	-		ABCV34_RS13220	0.84	-0.3
2,807,728	-		ABCV34_RS13220	0.84	-0.8
2,807,728	-		ABCV34_RS13220	0.84	-1.5
2,807,728	-		ABCV34_RS13220	0.84	-1.4
2,807,728	-		ABCV34_RS13220	0.84	-1.3
2,807,728	-		ABCV34_RS13220	0.84	+0.3
2,807,862	+		ABCV34_RS13220	0.90	-2.0
2,807,863	-		ABCV34_RS13220	0.90	-1.0
2,808,009	+				-0.8
2,808,009	+				+0.6
2,808,009	+				-0.5
2,808,009	+				-0.4
2,808,009	+				-1.1
2,808,009	+				+0.1
2,808,009	+				-0.3
2,808,010	-				-1.1
2,808,010	-				-0.8
2,808,010	-				-1.5
2,808,010	-				-3.4
2,808,010	-				-1.7
2,808,010	-				+0.3
2,808,135	+				-1.4
2,808,135	+				-0.4
2,808,135	+				+0.5
2,808,135	+				-1.1
2,808,135	+				-1.0
2,808,135	+				-1.3
2,808,135	+				-0.7
2,808,135	+				-0.6
2,808,135	+				-0.7
2,808,135	+				+1.3
2,808,135	+				-0.2
2,808,136	-				-1.3
2,808,136	-				-2.0
2,808,136	-				+1.9
2,808,136	-				-0.5
2,808,136	-				-1.7
2,808,136	-				-0.3
2,808,162	+				+0.6
2,808,162	+				-1.5
2,808,162	+				+0.8
2,808,162	+				-0.8
2,808,162	+				-2.3
2,808,163	-				-1.2
2,808,163	-				-0.8
2,808,163	-				+0.5
2,808,163	-				+0.2
2,808,163	-				-0.6
2,808,163	-				-0.4
2,808,170	+				-0.9
2,808,252	+		ABCV34_RS13225	0.15	-0.6
2,808,252	+		ABCV34_RS13225	0.15	-0.1
2,808,252	+		ABCV34_RS13225	0.15	-1.5
2,808,252	+		ABCV34_RS13225	0.15	+0.1
2,808,252	+		ABCV34_RS13225	0.15	+1.1
2,808,252	+		ABCV34_RS13225	0.15	-1.4
2,808,252	+		ABCV34_RS13225	0.15	-2.3
2,808,253	-		ABCV34_RS13225	0.15	-1.7
2,808,253	-		ABCV34_RS13225	0.15	-1.2
2,808,253	-		ABCV34_RS13225	0.15	-1.8
2,808,253	-		ABCV34_RS13225	0.15	-0.6
2,808,253	-		ABCV34_RS13225	0.15	-2.3
2,808,253	-		ABCV34_RS13225	0.15	-0.7
2,808,253	-		ABCV34_RS13225	0.15	-0.3
2,808,253	-		ABCV34_RS13225	0.15	-2.1
2,808,253	-		ABCV34_RS13225	0.15	-0.5
2,808,279	+		ABCV34_RS13225	0.19	-1.2
2,808,280	-		ABCV34_RS13225	0.19	-0.9
2,808,312	+		ABCV34_RS13225	0.25	+1.0
2,808,312	+		ABCV34_RS13225	0.25	-0.8
2,808,312	+		ABCV34_RS13225	0.25	-0.9
2,808,312	+		ABCV34_RS13225	0.25	-3.2
2,808,312	+		ABCV34_RS13225	0.25	-0.7
2,808,312	+		ABCV34_RS13225	0.25	+0.2
2,808,312	+		ABCV34_RS13225	0.25	+0.2
2,808,312	+		ABCV34_RS13225	0.25	-0.6
2,808,312	+		ABCV34_RS13225	0.25	-1.2
2,808,312	+		ABCV34_RS13225	0.25	-0.5
2,808,312	+		ABCV34_RS13225	0.25	-2.1
2,808,313	-		ABCV34_RS13225	0.25	-2.2
2,808,313	-		ABCV34_RS13225	0.25	+0.1
2,808,313	-		ABCV34_RS13225	0.25	+0.6
2,808,313	-		ABCV34_RS13225	0.25	+0.8
2,808,399	+		ABCV34_RS13225	0.39	-0.1
2,808,399	+		ABCV34_RS13225	0.39	-0.7
2,808,399	+		ABCV34_RS13225	0.39	-0.7
2,808,400	-		ABCV34_RS13225	0.39	-0.8
2,808,400	-		ABCV34_RS13225	0.39	+0.1
2,808,400	-		ABCV34_RS13225	0.39	-1.0
2,808,463	+		ABCV34_RS13225	0.49	-3.3
2,808,464	-		ABCV34_RS13225	0.49	+1.1
2,808,464	-		ABCV34_RS13225	0.49	-1.1
2,808,541	+		ABCV34_RS13225	0.62	+0.2
2,808,541	+		ABCV34_RS13225	0.62	-1.0
2,808,541	+		ABCV34_RS13225	0.62	-2.5
2,808,541	+		ABCV34_RS13225	0.62	+0.4
2,808,541	+		ABCV34_RS13225	0.62	-0.5
2,808,541	+		ABCV34_RS13225	0.62	+0.5
2,808,541	+		ABCV34_RS13225	0.62	+0.7
2,808,542	-		ABCV34_RS13225	0.62	-0.0
2,808,542	-		ABCV34_RS13225	0.62	-2.5
2,808,542	-		ABCV34_RS13225	0.62	-1.5
2,808,691	+		ABCV34_RS13225	0.86	-0.9
2,808,692	-		ABCV34_RS13225	0.86	+0.5
2,808,784	+				-0.7
2,808,785	-				-1.1
2,808,785	-				-1.5
2,808,860	+				-3.5
2,808,860	+				-0.1
2,808,860	+				-0.6
2,808,861	-				-0.5
2,808,861	-				-1.3
2,808,861	-				-0.2
2,808,861	-				-0.3
2,808,861	-				-1.1
2,808,861	-				-0.2
2,808,872	+		ABCV34_RS13230	0.10	-2.9
2,808,872	+		ABCV34_RS13230	0.10	+0.3
2,808,880	+		ABCV34_RS13230	0.11	-2.1
2,808,880	+		ABCV34_RS13230	0.11	-1.9
2,808,880	+		ABCV34_RS13230	0.11	-0.8
2,808,880	+		ABCV34_RS13230	0.11	-0.3
2,808,880	+		ABCV34_RS13230	0.11	-1.0
2,808,880	+		ABCV34_RS13230	0.11	-1.7
2,808,880	+		ABCV34_RS13230	0.11	-1.1
2,808,881	-		ABCV34_RS13230	0.11	+0.0
2,808,881	-		ABCV34_RS13230	0.11	-1.4
2,808,881	-		ABCV34_RS13230	0.11	-1.5
2,808,881	-		ABCV34_RS13230	0.11	-0.7
2,808,881	-		ABCV34_RS13230	0.11	-0.6
2,808,881	-		ABCV34_RS13230	0.11	+0.3
2,808,881	-		ABCV34_RS13230	0.11	-0.3
2,808,881	-		ABCV34_RS13230	0.11	-0.1
2,808,881	-		ABCV34_RS13230	0.11	-0.8
2,808,885	+		ABCV34_RS13230	0.12	-1.1
2,808,905	+		ABCV34_RS13230	0.14	-0.1
2,808,905	+		ABCV34_RS13230	0.14	-0.7
2,808,906	-		ABCV34_RS13230	0.14	-1.3
2,808,906	-		ABCV34_RS13230	0.14	+0.5
2,808,906	-		ABCV34_RS13230	0.14	+1.1
2,808,906	-		ABCV34_RS13230	0.14	-1.3
2,808,906	-		ABCV34_RS13230	0.14	-0.6
2,808,916	+		ABCV34_RS13230	0.15	+1.3
2,808,916	+		ABCV34_RS13230	0.15	-0.4
2,808,916	+		ABCV34_RS13230	0.15	-0.4
2,808,917	-		ABCV34_RS13230	0.15	+1.3
2,808,917	-		ABCV34_RS13230	0.15	+0.4
2,808,917	-		ABCV34_RS13230	0.15	-0.8
2,808,917	-		ABCV34_RS13230	0.15	-0.4
2,808,917	-		ABCV34_RS13230	0.15	-2.0
2,808,917	-		ABCV34_RS13230	0.15	-1.4
2,808,998	+		ABCV34_RS13230	0.24	+0.3
2,808,999	-		ABCV34_RS13230	0.24	-0.2
2,808,999	-		ABCV34_RS13230	0.24	-2.1
2,809,000	-		ABCV34_RS13230	0.24	-0.9
2,809,034	+		ABCV34_RS13230	0.28	-0.4
2,809,034	+		ABCV34_RS13230	0.28	-0.5
2,809,034	+		ABCV34_RS13230	0.28	-0.2
2,809,035	-		ABCV34_RS13230	0.28	-0.8
2,809,062	+		ABCV34_RS13230	0.31	-0.1
2,809,106	+		ABCV34_RS13230	0.36	-0.5
2,809,122	-		ABCV34_RS13230	0.37	-1.3
2,809,122	-		ABCV34_RS13230	0.37	-1.6