Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09920

Experiment: Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate
2,119,016	+		ABCV34_RS09915	0.51	-1.8
2,119,016	+		ABCV34_RS09915	0.51	-1.0
2,119,016	+		ABCV34_RS09915	0.51	-0.6
2,119,016	+		ABCV34_RS09915	0.51	-0.7
2,119,016	+		ABCV34_RS09915	0.51	-0.3
2,119,016	+		ABCV34_RS09915	0.51	-2.5
2,119,016	+		ABCV34_RS09915	0.51	-2.1
2,119,016	+		ABCV34_RS09915	0.51	+1.1
2,119,016	+		ABCV34_RS09915	0.51	-1.4
2,119,016	+		ABCV34_RS09915	0.51	-2.2
2,119,016	+		ABCV34_RS09915	0.51	-0.6
2,119,016	+		ABCV34_RS09915	0.51	-0.4
2,119,016	+		ABCV34_RS09915	0.51	-2.1
2,119,016	+		ABCV34_RS09915	0.51	-0.8
2,119,016	+		ABCV34_RS09915	0.51	-0.1
2,119,017	-		ABCV34_RS09915	0.51	-0.6
2,119,017	-		ABCV34_RS09915	0.51	+0.3
2,119,017	-		ABCV34_RS09915	0.51	-1.3
2,119,017	-		ABCV34_RS09915	0.51	-1.1
2,119,017	-		ABCV34_RS09915	0.51	+0.8
2,119,017	-		ABCV34_RS09915	0.51	-1.5
2,119,017	-		ABCV34_RS09915	0.51	-1.5
2,119,017	-		ABCV34_RS09915	0.51	-0.8
2,119,017	-		ABCV34_RS09915	0.51	-2.7
2,119,017	-		ABCV34_RS09915	0.51	-1.4
2,119,017	-		ABCV34_RS09915	0.51	-1.5
2,119,017	-		ABCV34_RS09915	0.51	-1.5
2,119,017	-		ABCV34_RS09915	0.51	+0.5
2,119,017	-		ABCV34_RS09915	0.51	-0.6
2,119,017	-		ABCV34_RS09915	0.51	-1.1
2,119,017	-		ABCV34_RS09915	0.51	-1.6
2,119,017	-		ABCV34_RS09915	0.51	-1.4
2,119,017	-		ABCV34_RS09915	0.51	-1.3
2,119,017	-		ABCV34_RS09915	0.51	+0.7
2,119,035	+		ABCV34_RS09915	0.52	+0.1
2,119,418	+		ABCV34_RS09915	0.76	-1.2
2,119,419	-		ABCV34_RS09915	0.77	-0.9
2,119,751	+				+0.9
2,119,751	+				-1.0
2,119,751	+				-0.8
2,119,751	+				-3.5
2,119,751	+				+0.4
2,119,751	+				-1.3
2,119,751	+				-1.6
2,119,752	-				+1.0
2,119,752	-				-0.4
2,119,752	-				-0.5
2,119,752	-				-1.0
2,119,752	-				-0.3
2,119,752	-				+0.6
2,119,759	+				+0.0
2,119,759	+				-1.6
2,119,759	+				-2.3
2,119,759	+				-0.5
2,119,759	+				-0.6
2,119,759	+				+0.3
2,119,759	+				-0.6
2,119,759	+				-1.1
2,119,759	+				-0.7
2,119,760	-				-0.2
2,119,760	-				-0.5
2,119,760	-				+0.1
2,119,760	-				-0.2
2,119,760	-				-1.5
2,119,760	-				-0.0
2,119,760	-				-0.3
2,119,760	-				-0.9
2,119,760	-				-0.3
2,119,760	-				-0.8
2,119,760	-				-2.3
2,119,760	-				-0.0
2,119,760	-				-0.0
2,119,760	-				-0.5
2,119,788	+				-0.1
2,119,788	+				-0.3
2,119,788	+				-0.5
2,119,788	+				+1.5
2,119,788	+				+1.9
2,119,789	-				+1.0
2,119,789	-				-0.7
2,119,789	-				-0.9
2,119,789	-				-1.6
2,119,789	-				-0.4
2,119,950	-				-0.2
2,120,062	+		ABCV34_RS09920	0.17	-0.9
2,120,062	+		ABCV34_RS09920	0.17	-1.7
2,120,063	-		ABCV34_RS09920	0.17	-0.9
2,120,063	-		ABCV34_RS09920	0.17	+0.9
2,120,063	-		ABCV34_RS09920	0.17	-1.3
2,120,063	-		ABCV34_RS09920	0.17	-0.5
2,120,063	-		ABCV34_RS09920	0.17	-1.3
2,120,588	+				+0.7
2,120,589	-				-3.2
2,120,589	-				+0.3
2,120,589	-				-1.1
2,120,589	-				-1.7
2,120,589	-				-1.5
2,120,589	-				-0.9
2,120,589	-				+0.3
2,120,589	-				-1.4
2,120,719	+				+0.1
2,120,731	+				-0.8
2,120,731	+				-1.4
2,120,735	+				-1.7
2,120,735	+				-0.9
2,120,735	+				-1.4
2,120,735	+				-0.8
2,120,735	+				+1.6
2,120,735	+				+0.4
2,120,735	+				-0.4
2,120,735	+				-1.8
2,120,735	+				-0.8
2,120,735	+				+1.5
2,120,735	+				-1.0
2,120,735	+				-0.2
2,120,735	+				-0.1
2,120,735	+				-1.4
2,120,735	+				-1.4
2,120,736	-				-2.3
2,120,736	-				+2.6
2,120,736	-				-2.6
2,120,736	-				-0.9
2,120,736	-				-1.2
2,120,736	-				-0.3
2,120,736	-				-2.0
2,120,736	-				-1.7
2,120,736	-				-0.0
2,120,736	-				-0.6
2,120,736	-				-3.6
2,120,753	+				-1.6
2,120,753	+				-0.7
2,120,753	+				-0.6
2,120,754	-				-1.1
2,120,754	-				+0.1
2,120,754	-				-0.6
2,120,782	+				-1.4
2,120,798	-				-2.2
2,120,868	+				-1.5
2,120,869	-				-1.7
2,120,869	-				-0.6
2,120,928	+				-0.9
2,120,928	+				+0.4
2,120,928	+				+0.4
2,120,928	+				-1.0
2,120,928	+				-0.6
2,120,929	-				-2.4
2,120,929	-				-0.8
2,120,929	-				-1.5
2,120,929	-				-1.6
2,120,929	-				-1.4
2,120,967	+				-0.9
2,121,040	+		ABCV34_RS09925	0.13	-0.3
2,121,040	+		ABCV34_RS09925	0.13	-1.4
2,121,040	+		ABCV34_RS09925	0.13	-0.6
2,121,041	-		ABCV34_RS09925	0.13	+0.2
2,121,041	-		ABCV34_RS09925	0.13	-2.3
2,121,041	-		ABCV34_RS09925	0.13	-0.4
2,121,041	-		ABCV34_RS09925	0.13	-1.6
2,121,041	-		ABCV34_RS09925	0.13	-1.3
2,121,041	-		ABCV34_RS09925	0.13	-0.6
2,121,041	-		ABCV34_RS09925	0.13	-0.9
2,121,041	-		ABCV34_RS09925	0.13	-0.9
2,121,111	+		ABCV34_RS09925	0.17	-1.7
2,121,112	-		ABCV34_RS09925	0.17	-0.8
2,121,112	-		ABCV34_RS09925	0.17	-0.9
2,121,130	+		ABCV34_RS09925	0.18	-0.4
2,121,131	-		ABCV34_RS09925	0.18	+0.7
2,121,141	+		ABCV34_RS09925	0.19	+0.7
2,121,141	+		ABCV34_RS09925	0.19	-2.8
2,121,141	+		ABCV34_RS09925	0.19	+0.1
2,121,141	+		ABCV34_RS09925	0.19	-1.0
2,121,141	+		ABCV34_RS09925	0.19	-2.5
2,121,141	+		ABCV34_RS09925	0.19	-1.8
2,121,141	+		ABCV34_RS09925	0.19	-0.2
2,121,141	+		ABCV34_RS09925	0.19	-0.4
2,121,141	+		ABCV34_RS09925	0.19	-0.9
2,121,141	+		ABCV34_RS09925	0.19	+0.0
2,121,141	+		ABCV34_RS09925	0.19	-0.8
2,121,141	+		ABCV34_RS09925	0.19	-0.6
2,121,141	+		ABCV34_RS09925	0.19	-1.6
2,121,142	-		ABCV34_RS09925	0.19	-1.4
2,121,142	-		ABCV34_RS09925	0.19	-0.2
2,121,142	-		ABCV34_RS09925	0.19	-2.1
2,121,142	-		ABCV34_RS09925	0.19	-0.3
2,121,142	-		ABCV34_RS09925	0.19	-1.0
2,121,142	-		ABCV34_RS09925	0.19	-1.0
2,121,142	-		ABCV34_RS09925	0.19	+2.6
2,121,142	-		ABCV34_RS09925	0.19	+1.5
2,121,142	-		ABCV34_RS09925	0.19	+1.9
2,121,165	+		ABCV34_RS09925	0.20	-0.4
2,121,165	+		ABCV34_RS09925	0.20	-1.0
2,121,165	+		ABCV34_RS09925	0.20	-1.3
2,121,165	+		ABCV34_RS09925	0.20	+0.1
2,121,166	-		ABCV34_RS09925	0.20	-1.2
2,121,166	-		ABCV34_RS09925	0.20	+0.1
2,121,166	-		ABCV34_RS09925	0.20	-2.0
2,121,166	-		ABCV34_RS09925	0.20	-1.1
2,121,166	-		ABCV34_RS09925	0.20	-0.2
2,121,380	+		ABCV34_RS09925	0.34	+0.1
2,121,380	+		ABCV34_RS09925	0.34	-1.6
2,121,380	+		ABCV34_RS09925	0.34	-1.6
2,121,380	+		ABCV34_RS09925	0.34	+1.1
2,121,380	+		ABCV34_RS09925	0.34	-1.8
2,121,381	-		ABCV34_RS09925	0.34	-1.3
2,121,381	-		ABCV34_RS09925	0.34	-1.2
2,121,381	-		ABCV34_RS09925	0.34	-2.2
2,121,381	-		ABCV34_RS09925	0.34	+0.4