Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06870

Experiment: Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate
1,479,224	+				-2.7
1,479,224	+				-1.2
1,479,224	+				+1.6
1,479,224	+				-0.7
1,479,224	+				-1.5
1,479,224	+				-0.6
1,479,224	+				-1.0
1,479,224	+				-1.7
1,479,224	+				-2.7
1,479,224	+				-1.1
1,479,224	+				-0.2
1,479,224	+				-1.5
1,479,224	+				-0.4
1,479,224	+				-1.5
1,479,224	+				-0.2
1,479,225	-				-2.4
1,479,225	-				-2.3
1,479,225	-				-1.3
1,479,225	-				-1.8
1,479,225	-				-1.3
1,479,225	-				-1.0
1,479,225	-				-1.5
1,479,225	-				-1.0
1,479,225	-				-1.6
1,479,225	-				-2.1
1,479,225	-				-2.3
1,479,225	-				-1.9
1,479,225	-				-0.9
1,479,225	-				-1.5
1,479,225	-				+0.6
1,479,266	+				-1.2
1,479,266	+				-0.6
1,479,266	+				-2.0
1,479,266	+				-1.1
1,479,266	+				+0.2
1,479,267	-				-2.1
1,479,267	-				-1.7
1,479,267	-				-0.1
1,479,267	-				-0.7
1,479,267	-				-1.6
1,479,267	-				-1.7
1,479,267	-				-1.6
1,479,267	-				-0.6
1,479,267	-				+0.7
1,479,267	-				-3.0
1,479,269	+				-2.5
1,479,269	+				-0.2
1,479,269	+				-1.1
1,479,270	-				+0.3
1,479,270	-				-2.4
1,479,270	-				-1.3
1,479,270	-				-0.2
1,479,270	-				+0.7
1,479,270	-				-2.9
1,479,270	-				-1.2
1,479,270	-				-0.8
1,479,270	-				+2.0
1,479,270	-				-4.2
1,479,270	-				-1.5
1,479,270	-				-2.3
1,479,270	-				-0.9
1,479,330	+		ABCV34_RS06860	0.21	-1.7
1,479,331	-		ABCV34_RS06860	0.21	+0.0
1,479,610	+		ABCV34_RS06865	0.21	+0.5
1,479,610	+		ABCV34_RS06865	0.21	+0.3
1,479,611	-		ABCV34_RS06865	0.21	-2.3
1,479,829	+		ABCV34_RS06865	0.54	+0.1
1,479,829	+		ABCV34_RS06865	0.54	-1.8
1,479,830	-		ABCV34_RS06865	0.55	-1.7
1,479,830	-		ABCV34_RS06865	0.55	-1.7
1,479,830	-		ABCV34_RS06865	0.55	-1.1
1,479,830	-		ABCV34_RS06865	0.55	-1.9
1,479,830	-		ABCV34_RS06865	0.55	-1.5
1,479,863	-		ABCV34_RS06865	0.60	-0.8
1,479,913	-		ABCV34_RS06865	0.67	-0.2
1,479,913	-		ABCV34_RS06865	0.67	-2.3
1,479,913	-		ABCV34_RS06865	0.67	-1.8
1,479,913	-		ABCV34_RS06865	0.67	-3.5
1,479,931	+		ABCV34_RS06865	0.70	-0.9
1,479,931	+		ABCV34_RS06865	0.70	-0.8
1,479,931	+		ABCV34_RS06865	0.70	-0.6
1,479,931	+		ABCV34_RS06865	0.70	-1.4
1,479,931	+		ABCV34_RS06865	0.70	-1.8
1,479,931	+		ABCV34_RS06865	0.70	+0.8
1,479,932	-		ABCV34_RS06865	0.70	-2.1
1,479,932	-		ABCV34_RS06865	0.70	-1.4
1,479,932	-		ABCV34_RS06865	0.70	-1.4
1,479,932	-		ABCV34_RS06865	0.70	+1.1
1,479,932	-		ABCV34_RS06865	0.70	-0.8
1,479,932	-		ABCV34_RS06865	0.70	+0.3
1,479,965	-		ABCV34_RS06865	0.75	-0.9
1,479,965	-		ABCV34_RS06865	0.75	-0.4
1,480,006	+		ABCV34_RS06865	0.81	+1.2
1,480,006	+		ABCV34_RS06865	0.81	-1.3
1,480,006	+		ABCV34_RS06865	0.81	-1.9
1,480,006	+		ABCV34_RS06865	0.81	+0.2
1,480,007	-		ABCV34_RS06865	0.82	+0.2
1,480,007	-		ABCV34_RS06865	0.82	-1.4
1,480,007	-		ABCV34_RS06865	0.82	-1.0
1,480,007	-		ABCV34_RS06865	0.82	-3.4
1,480,007	-		ABCV34_RS06865	0.82	-2.0
1,480,304	+		ABCV34_RS06870	0.11	-2.2
1,480,304	+		ABCV34_RS06870	0.11	-2.0
1,480,305	-		ABCV34_RS06870	0.11	-0.7
1,480,305	-		ABCV34_RS06870	0.11	-1.4
1,480,343	+		ABCV34_RS06870	0.14	-1.4
1,480,343	+		ABCV34_RS06870	0.14	-2.0
1,480,343	+		ABCV34_RS06870	0.14	-1.9
1,480,343	+		ABCV34_RS06870	0.14	-2.4
1,480,344	-		ABCV34_RS06870	0.14	-0.4
1,480,344	-		ABCV34_RS06870	0.14	-1.4
1,480,344	-		ABCV34_RS06870	0.14	-2.4
1,480,421	+		ABCV34_RS06870	0.19	-2.7
1,480,421	+		ABCV34_RS06870	0.19	+0.1
1,480,421	+		ABCV34_RS06870	0.19	+2.6
1,480,421	+		ABCV34_RS06870	0.19	-1.0
1,480,421	+		ABCV34_RS06870	0.19	-2.2
1,480,421	+		ABCV34_RS06870	0.19	-2.0
1,480,421	+		ABCV34_RS06870	0.19	-0.2
1,480,422	-		ABCV34_RS06870	0.19	-1.8
1,480,422	-		ABCV34_RS06870	0.19	-2.4
1,480,422	-		ABCV34_RS06870	0.19	+0.4
1,480,422	-		ABCV34_RS06870	0.19	-1.9
1,480,422	-		ABCV34_RS06870	0.19	-0.8
1,480,422	-		ABCV34_RS06870	0.19	-3.4
1,480,422	-		ABCV34_RS06870	0.19	-1.2
1,480,422	-		ABCV34_RS06870	0.19	+0.7
1,480,422	-		ABCV34_RS06870	0.19	-1.0
1,480,422	-		ABCV34_RS06870	0.19	-0.8
1,480,464	+		ABCV34_RS06870	0.22	-2.1
1,480,465	-		ABCV34_RS06870	0.22	-2.1
1,480,496	+		ABCV34_RS06870	0.24	-1.7
1,480,496	+		ABCV34_RS06870	0.24	+0.4
1,480,497	-		ABCV34_RS06870	0.24	-3.3
1,480,497	-		ABCV34_RS06870	0.24	-0.8
1,480,497	-		ABCV34_RS06870	0.24	-1.6
1,480,514	+		ABCV34_RS06870	0.25	-1.0
1,480,514	+		ABCV34_RS06870	0.25	-3.2
1,480,514	+		ABCV34_RS06870	0.25	-0.6
1,480,514	+		ABCV34_RS06870	0.25	+0.4
1,480,514	+		ABCV34_RS06870	0.25	-1.0
1,480,515	-		ABCV34_RS06870	0.25	-0.7
1,480,515	-		ABCV34_RS06870	0.25	-1.6
1,480,515	-		ABCV34_RS06870	0.25	-1.6
1,480,517	+		ABCV34_RS06870	0.26	-0.0
1,480,517	+		ABCV34_RS06870	0.26	-1.0
1,480,517	+		ABCV34_RS06870	0.26	-1.3
1,480,517	+		ABCV34_RS06870	0.26	-0.4
1,480,517	+		ABCV34_RS06870	0.26	-2.3
1,480,517	+		ABCV34_RS06870	0.26	-0.8
1,480,518	-		ABCV34_RS06870	0.26	-0.3
1,480,518	-		ABCV34_RS06870	0.26	-0.3
1,480,518	-		ABCV34_RS06870	0.26	-0.0
1,480,518	-		ABCV34_RS06870	0.26	-2.9
1,480,518	-		ABCV34_RS06870	0.26	-1.9
1,480,592	+		ABCV34_RS06870	0.31	+0.4
1,480,592	+		ABCV34_RS06870	0.31	-0.5
1,480,592	+		ABCV34_RS06870	0.31	-1.2
1,480,593	-		ABCV34_RS06870	0.31	+1.1
1,480,655	+		ABCV34_RS06870	0.35	+0.5
1,480,655	+		ABCV34_RS06870	0.35	-1.0
1,480,655	+		ABCV34_RS06870	0.35	+0.4
1,480,655	+		ABCV34_RS06870	0.35	-3.8
1,480,656	-		ABCV34_RS06870	0.35	-1.1
1,480,656	-		ABCV34_RS06870	0.35	+0.0
1,480,656	-		ABCV34_RS06870	0.35	-0.0
1,480,821	+		ABCV34_RS06870	0.46	+0.0
1,480,821	+		ABCV34_RS06870	0.46	-1.6
1,480,821	+		ABCV34_RS06870	0.46	-1.1
1,480,821	+		ABCV34_RS06870	0.46	-0.8
1,480,821	+		ABCV34_RS06870	0.46	-1.5
1,480,821	+		ABCV34_RS06870	0.46	-1.4
1,480,821	+		ABCV34_RS06870	0.46	-2.6
1,480,822	-		ABCV34_RS06870	0.46	-1.7
1,480,822	-		ABCV34_RS06870	0.46	-1.8
1,480,822	-		ABCV34_RS06870	0.46	-0.9
1,480,822	-		ABCV34_RS06870	0.46	-2.2
1,480,822	-		ABCV34_RS06870	0.46	-2.8
1,480,822	-		ABCV34_RS06870	0.46	-1.6
1,480,822	-		ABCV34_RS06870	0.46	-2.4
1,480,822	-		ABCV34_RS06870	0.46	-0.0
1,480,822	-		ABCV34_RS06870	0.46	-1.4
1,480,822	-		ABCV34_RS06870	0.46	-1.1
1,480,823	+		ABCV34_RS06870	0.46	-3.5
1,480,823	+		ABCV34_RS06870	0.46	-0.6
1,480,823	+		ABCV34_RS06870	0.46	+0.6
1,480,823	+		ABCV34_RS06870	0.46	-1.9
1,480,824	-		ABCV34_RS06870	0.46	-0.2
1,480,824	-		ABCV34_RS06870	0.46	-1.6
1,480,824	-		ABCV34_RS06870	0.46	-0.0
1,480,824	-		ABCV34_RS06870	0.46	-0.9
1,480,824	-		ABCV34_RS06870	0.46	-2.3
1,480,824	-		ABCV34_RS06870	0.46	-1.4
1,480,824	-		ABCV34_RS06870	0.46	+0.4
1,480,853	+		ABCV34_RS06870	0.48	-1.8
1,480,853	+		ABCV34_RS06870	0.48	-1.2
1,480,853	+		ABCV34_RS06870	0.48	-0.5
1,480,853	+		ABCV34_RS06870	0.48	-0.3
1,480,853	+		ABCV34_RS06870	0.48	-0.2
1,480,853	+		ABCV34_RS06870	0.48	-1.5
1,480,853	+		ABCV34_RS06870	0.48	-1.4
1,480,853	+		ABCV34_RS06870	0.48	-3.2
1,480,853	+		ABCV34_RS06870	0.48	-3.9
1,480,853	+		ABCV34_RS06870	0.48	-2.5
1,480,853	+		ABCV34_RS06870	0.48	-1.2
1,480,853	+		ABCV34_RS06870	0.48	+0.2
1,480,853	+		ABCV34_RS06870	0.48	-1.6
1,480,853	+		ABCV34_RS06870	0.48	-3.2
1,480,853	+		ABCV34_RS06870	0.48	-0.6
1,480,853	+		ABCV34_RS06870	0.48	-1.5
1,480,853	+		ABCV34_RS06870	0.48	-1.9
1,480,853	+		ABCV34_RS06870	0.48	-0.0
1,480,854	-		ABCV34_RS06870	0.48	-2.9
1,480,854	-		ABCV34_RS06870	0.48	-2.1
1,480,854	-		ABCV34_RS06870	0.48	-2.2
1,480,854	-		ABCV34_RS06870	0.48	-0.8
1,480,854	-		ABCV34_RS06870	0.48	-0.3
1,480,854	-		ABCV34_RS06870	0.48	-1.4
1,480,854	-		ABCV34_RS06870	0.48	-2.2
1,480,854	-		ABCV34_RS06870	0.48	-1.4
1,480,854	-		ABCV34_RS06870	0.48	-1.8
1,480,854	-		ABCV34_RS06870	0.48	-0.7
1,480,854	-		ABCV34_RS06870	0.48	-1.1
1,480,854	-		ABCV34_RS06870	0.48	-1.5
1,480,854	-		ABCV34_RS06870	0.48	-1.5
1,480,896	-		ABCV34_RS06870	0.51	-1.4
1,480,901	+		ABCV34_RS06870	0.51	-0.5
1,480,901	+		ABCV34_RS06870	0.51	+0.4
1,480,901	+		ABCV34_RS06870	0.51	-1.9
1,480,901	+		ABCV34_RS06870	0.51	-2.4
1,480,901	+		ABCV34_RS06870	0.51	+1.1
1,480,902	-		ABCV34_RS06870	0.52	-0.4
1,480,902	-		ABCV34_RS06870	0.52	-0.7
1,480,902	-		ABCV34_RS06870	0.52	-0.8
1,480,934	+		ABCV34_RS06870	0.54	+0.3
1,480,934	+		ABCV34_RS06870	0.54	-2.4
1,480,934	+		ABCV34_RS06870	0.54	-2.2
1,480,935	-		ABCV34_RS06870	0.54	-0.7
1,480,935	-		ABCV34_RS06870	0.54	+1.2
1,480,935	-		ABCV34_RS06870	0.54	-0.3
1,480,935	-		ABCV34_RS06870	0.54	-0.1
1,480,935	-		ABCV34_RS06870	0.54	-2.1
1,480,935	-		ABCV34_RS06870	0.54	-2.4
1,480,935	-		ABCV34_RS06870	0.54	-0.6
1,480,937	+		ABCV34_RS06870	0.54	-2.1
1,480,937	+		ABCV34_RS06870	0.54	-2.5
1,480,937	+		ABCV34_RS06870	0.54	-0.1
1,480,937	+		ABCV34_RS06870	0.54	-1.4
1,480,937	+		ABCV34_RS06870	0.54	-0.6
1,480,937	+		ABCV34_RS06870	0.54	-2.2
1,480,937	+		ABCV34_RS06870	0.54	-1.2
1,480,938	-		ABCV34_RS06870	0.54	-0.0
1,480,938	-		ABCV34_RS06870	0.54	+0.6
1,480,938	-		ABCV34_RS06870	0.54	-1.5
1,480,938	-		ABCV34_RS06870	0.54	-1.3
1,480,938	-		ABCV34_RS06870	0.54	-1.1
1,480,938	-		ABCV34_RS06870	0.54	-2.9
1,480,938	-		ABCV34_RS06870	0.54	-1.6
1,480,938	-		ABCV34_RS06870	0.54	+0.8
1,480,938	-		ABCV34_RS06870	0.54	-1.8
1,480,938	-		ABCV34_RS06870	0.54	-0.7
1,480,938	-		ABCV34_RS06870	0.54	-0.6
1,480,984	-		ABCV34_RS06870	0.57	+0.1
1,480,992	-		ABCV34_RS06870	0.58	+2.0
1,481,027	+		ABCV34_RS06870	0.60	-0.0
1,481,027	+		ABCV34_RS06870	0.60	-0.8
1,481,028	-		ABCV34_RS06870	0.60	+1.0
1,481,036	+		ABCV34_RS06870	0.61	+0.0
1,481,037	-		ABCV34_RS06870	0.61	+0.3
1,481,105	+		ABCV34_RS06870	0.65	-2.5
1,481,105	+		ABCV34_RS06870	0.65	-2.1
1,481,105	+		ABCV34_RS06870	0.65	-0.2
1,481,105	+		ABCV34_RS06870	0.65	-1.7
1,481,105	+		ABCV34_RS06870	0.65	-0.5
1,481,105	+		ABCV34_RS06870	0.65	-0.8
1,481,105	+		ABCV34_RS06870	0.65	-2.5
1,481,106	-		ABCV34_RS06870	0.65	+0.1
1,481,106	-		ABCV34_RS06870	0.65	-1.2
1,481,106	-		ABCV34_RS06870	0.65	-1.6
1,481,106	-		ABCV34_RS06870	0.65	-1.5
1,481,106	-		ABCV34_RS06870	0.65	-0.2
1,481,106	-		ABCV34_RS06870	0.65	-1.8
1,481,106	-		ABCV34_RS06870	0.65	-1.4
1,481,106	-		ABCV34_RS06870	0.65	-0.9
1,481,132	+		ABCV34_RS06870	0.67	-1.0
1,481,132	+		ABCV34_RS06870	0.67	-1.9
1,481,132	+		ABCV34_RS06870	0.67	-1.4
1,481,132	+		ABCV34_RS06870	0.67	-2.7
1,481,133	-		ABCV34_RS06870	0.67	-0.9
1,481,133	-		ABCV34_RS06870	0.67	-0.6
1,481,133	-		ABCV34_RS06870	0.67	-3.3
1,481,133	-		ABCV34_RS06870	0.67	-1.8
1,481,133	-		ABCV34_RS06870	0.67	-1.3
1,481,133	-		ABCV34_RS06870	0.67	-2.4
1,481,133	-		ABCV34_RS06870	0.67	-1.9
1,481,133	-		ABCV34_RS06870	0.67	-2.6
1,481,183	+		ABCV34_RS06870	0.71	-1.1
1,481,183	+		ABCV34_RS06870	0.71	-1.8
1,481,183	+		ABCV34_RS06870	0.71	-1.2
1,481,183	+		ABCV34_RS06870	0.71	-0.9
1,481,184	-		ABCV34_RS06870	0.71	-1.8
1,481,237	+		ABCV34_RS06870	0.74	-1.5
1,481,237	+		ABCV34_RS06870	0.74	-1.9
1,481,237	+		ABCV34_RS06870	0.74	-0.9
1,481,238	-		ABCV34_RS06870	0.74	-3.4
1,481,238	-		ABCV34_RS06870	0.74	-3.1
1,481,255	+		ABCV34_RS06870	0.75	-0.8
1,481,255	+		ABCV34_RS06870	0.75	-0.7
1,481,255	+		ABCV34_RS06870	0.75	-1.6
1,481,256	-		ABCV34_RS06870	0.75	-1.6
1,481,256	-		ABCV34_RS06870	0.75	-0.5
1,481,369	+		ABCV34_RS06870	0.83	-1.6
1,481,369	+		ABCV34_RS06870	0.83	-0.7
1,481,369	+		ABCV34_RS06870	0.83	-1.6
1,481,369	+		ABCV34_RS06870	0.83	-0.7
1,481,369	+		ABCV34_RS06870	0.83	-0.0
1,481,370	-		ABCV34_RS06870	0.83	-1.4
1,481,370	-		ABCV34_RS06870	0.83	+0.4
1,481,370	-		ABCV34_RS06870	0.83	-2.0
1,481,370	-		ABCV34_RS06870	0.83	-1.7
1,481,372	+		ABCV34_RS06870	0.83	-1.6
1,481,372	+		ABCV34_RS06870	0.83	-0.5
1,481,372	+		ABCV34_RS06870	0.83	-1.0
1,481,372	+		ABCV34_RS06870	0.83	-1.1
1,481,372	+		ABCV34_RS06870	0.83	-1.2
1,481,373	-		ABCV34_RS06870	0.83	-0.8
1,481,373	-		ABCV34_RS06870	0.83	-1.2
1,481,448	-		ABCV34_RS06870	0.88	-1.1
1,481,464	-		ABCV34_RS06870	0.89	-0.5
1,481,573	+				-1.0
1,481,573	+				-1.8
1,481,573	+				-0.0
1,481,573	+				-3.1
1,481,573	+				-2.6
1,481,574	-				+0.1
1,481,574	-				-1.3
1,481,620	-				-1.2
1,481,643	+				-0.9
1,481,643	+				-0.9
1,481,643	+				-1.2
1,481,643	+				-0.1
1,481,643	+				-1.9
1,481,644	-				-1.1
1,481,644	-				-1.2
1,481,670	+				+0.6
1,481,670	+				+0.6
1,481,671	-				-2.0
1,481,678	+				-1.4
1,481,679	-				-0.2
1,481,679	-				-1.4
1,481,679	-				-1.2
1,481,679	-				-1.6
1,481,679	-				-1.3
1,481,679	-				-1.5
1,481,679	-				-2.1
1,481,703	+				-0.1
1,481,703	+				-2.9
1,481,703	+				-2.5
1,481,703	+				-1.6
1,481,703	+				-0.2
1,481,703	+				+1.0
1,481,704	-				-1.4
1,481,704	-				-1.9
1,482,054	+		ABCV34_RS06880	0.19	-1.7
1,482,055	-		ABCV34_RS06880	0.19	-1.9
1,482,055	-		ABCV34_RS06880	0.19	-0.4
1,482,055	-		ABCV34_RS06880	0.19	+0.4
1,482,055	-		ABCV34_RS06880	0.19	-0.6
1,482,255	+		ABCV34_RS06880	0.40	-1.4
1,482,441	+		ABCV34_RS06880	0.59	-1.8
1,482,441	+		ABCV34_RS06880	0.59	+0.2
1,482,441	+		ABCV34_RS06880	0.59	-1.0
1,482,441	+		ABCV34_RS06880	0.59	-3.0
1,482,442	-		ABCV34_RS06880	0.60	-1.7
1,482,442	-		ABCV34_RS06880	0.60	-1.4
1,482,442	-		ABCV34_RS06880	0.60	-0.8
1,482,442	-		ABCV34_RS06880	0.60	-2.0
1,482,582	+		ABCV34_RS06880	0.74	-2.4
1,482,582	+		ABCV34_RS06880	0.74	-1.6
1,482,582	+		ABCV34_RS06880	0.74	-0.6
1,482,583	-		ABCV34_RS06880	0.74	-0.8
1,482,583	-		ABCV34_RS06880	0.74	-0.8