Experiment: no extra (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23990 and PFLU_RS23995 are separated by 444 nucleotides PFLU_RS23995 and PFLU_RS24000 are separated by 10 nucleotides
PFLU_RS23990: PFLU_RS23990 - sigma-54-dependent transcriptional regulator, at 5,373,165 to 5,374,676
_RS23990
PFLU_RS23995: PFLU_RS23995 - glycine cleavage system protein GcvH, at 5,375,121 to 5,375,504
_RS23995
PFLU_RS24000: PFLU_RS24000 - aminomethyl-transferring glycine dehydrogenase, at 5,375,515 to 5,378,355
_RS24000
Position (kb) 5375
5376 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5374.221 kb on + strand, within PFLU_RS23990 at 5374.221 kb on + strand, within PFLU_RS23990 at 5374.222 kb on - strand, within PFLU_RS23990 at 5374.222 kb on - strand, within PFLU_RS23990 at 5374.222 kb on - strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.238 kb on + strand, within PFLU_RS23990 at 5374.296 kb on + strand, within PFLU_RS23990 at 5374.296 kb on + strand, within PFLU_RS23990 at 5374.296 kb on + strand, within PFLU_RS23990 at 5374.297 kb on - strand, within PFLU_RS23990 at 5374.297 kb on - strand, within PFLU_RS23990 at 5374.297 kb on - strand, within PFLU_RS23990 at 5374.356 kb on - strand, within PFLU_RS23990 at 5374.356 kb on - strand, within PFLU_RS23990 at 5374.360 kb on - strand, within PFLU_RS23990 at 5374.360 kb on - strand, within PFLU_RS23990 at 5374.360 kb on - strand, within PFLU_RS23990 at 5374.360 kb on - strand, within PFLU_RS23990 at 5374.569 kb on + strand at 5374.569 kb on + strand at 5374.570 kb on - strand at 5374.570 kb on - strand at 5374.578 kb on + strand at 5374.578 kb on + strand at 5374.578 kb on + strand at 5374.579 kb on - strand at 5374.650 kb on + strand at 5374.651 kb on - strand at 5374.651 kb on - strand at 5374.651 kb on - strand at 5374.690 kb on + strand at 5374.766 kb on - strand at 5374.766 kb on - strand at 5374.939 kb on + strand at 5374.939 kb on + strand at 5374.939 kb on + strand at 5374.939 kb on + strand at 5374.939 kb on + strand at 5374.940 kb on - strand at 5374.940 kb on - strand at 5374.940 kb on - strand at 5375.013 kb on + strand at 5375.061 kb on - strand at 5375.259 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.316 kb on + strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.317 kb on - strand, within PFLU_RS23995 at 5375.447 kb on + strand, within PFLU_RS23995 at 5375.469 kb on + strand at 5375.469 kb on + strand at 5375.470 kb on - strand at 5375.470 kb on - strand at 5375.523 kb on + strand at 5375.533 kb on - strand at 5375.755 kb on + strand at 5375.755 kb on + strand at 5375.755 kb on + strand at 5375.755 kb on + strand at 5375.755 kb on + strand at 5375.755 kb on + strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.756 kb on - strand at 5375.770 kb on + strand at 5375.770 kb on + strand at 5375.770 kb on + strand at 5375.770 kb on + strand at 5375.770 kb on + strand at 5375.771 kb on - strand at 5375.771 kb on - strand at 5375.771 kb on - strand at 5375.771 kb on - strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.773 kb on + strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.774 kb on - strand at 5375.796 kb on + strand at 5375.830 kb on + strand, within PFLU_RS24000 at 5375.839 kb on + strand, within PFLU_RS24000 at 5375.839 kb on + strand, within PFLU_RS24000 at 5375.839 kb on + strand, within PFLU_RS24000 at 5375.839 kb on + strand, within PFLU_RS24000 at 5375.839 kb on + strand, within PFLU_RS24000 at 5375.840 kb on - strand, within PFLU_RS24000 at 5375.840 kb on - strand, within PFLU_RS24000 at 5375.849 kb on - strand, within PFLU_RS24000 at 5376.090 kb on + strand, within PFLU_RS24000 at 5376.160 kb on + strand, within PFLU_RS24000 at 5376.361 kb on + strand, within PFLU_RS24000 at 5376.361 kb on + strand, within PFLU_RS24000 at 5376.361 kb on + strand, within PFLU_RS24000 at 5376.361 kb on + strand, within PFLU_RS24000 at 5376.362 kb on - strand, within PFLU_RS24000 at 5376.362 kb on - strand, within PFLU_RS24000 at 5376.477 kb on + strand, within PFLU_RS24000 at 5376.477 kb on + strand, within PFLU_RS24000 at 5376.477 kb on + strand, within PFLU_RS24000 at 5376.477 kb on + strand, within PFLU_RS24000 at 5376.477 kb on + strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000 at 5376.478 kb on - strand, within PFLU_RS24000
Per-strain Table
Position Strand Gene LocusTag Fraction no extra (N); with MOPS remove 5,374,221 + PFLU_RS23990 0.70 +0.4 5,374,221 + PFLU_RS23990 0.70 -0.5 5,374,222 - PFLU_RS23990 0.70 -0.4 5,374,222 - PFLU_RS23990 0.70 +0.5 5,374,222 - PFLU_RS23990 0.70 -2.9 5,374,238 + PFLU_RS23990 0.71 +1.4 5,374,238 + PFLU_RS23990 0.71 +0.4 5,374,238 + PFLU_RS23990 0.71 -0.1 5,374,238 + PFLU_RS23990 0.71 -1.0 5,374,238 + PFLU_RS23990 0.71 -0.4 5,374,238 + PFLU_RS23990 0.71 +0.4 5,374,296 + PFLU_RS23990 0.75 -0.0 5,374,296 + PFLU_RS23990 0.75 +0.4 5,374,296 + PFLU_RS23990 0.75 +0.1 5,374,297 - PFLU_RS23990 0.75 +1.2 5,374,297 - PFLU_RS23990 0.75 +0.2 5,374,297 - PFLU_RS23990 0.75 +1.4 5,374,356 - PFLU_RS23990 0.79 -0.4 5,374,356 - PFLU_RS23990 0.79 -2.7 5,374,360 - PFLU_RS23990 0.79 -0.8 5,374,360 - PFLU_RS23990 0.79 -0.0 5,374,360 - PFLU_RS23990 0.79 -0.8 5,374,360 - PFLU_RS23990 0.79 -1.8 5,374,569 + +0.2 5,374,569 + +1.1 5,374,570 - -0.9 5,374,570 - -0.8 5,374,578 + +0.6 5,374,578 + +1.6 5,374,578 + +0.6 5,374,579 - +1.4 5,374,650 + -0.4 5,374,651 - +0.4 5,374,651 - -1.5 5,374,651 - +0.6 5,374,690 + -0.7 5,374,766 - -0.7 5,374,766 - +0.6 5,374,939 + +1.0 5,374,939 + -1.2 5,374,939 + -1.5 5,374,939 + -0.4 5,374,939 + -0.2 5,374,940 - +0.5 5,374,940 - +1.8 5,374,940 - -0.8 5,375,013 + -0.6 5,375,061 - +0.6 5,375,259 + PFLU_RS23995 0.36 +0.8 5,375,316 + PFLU_RS23995 0.51 -0.4 5,375,316 + PFLU_RS23995 0.51 +1.4 5,375,316 + PFLU_RS23995 0.51 -0.4 5,375,316 + PFLU_RS23995 0.51 +0.5 5,375,316 + PFLU_RS23995 0.51 -0.7 5,375,316 + PFLU_RS23995 0.51 -2.3 5,375,316 + PFLU_RS23995 0.51 +0.4 5,375,316 + PFLU_RS23995 0.51 -0.5 5,375,316 + PFLU_RS23995 0.51 +0.2 5,375,316 + PFLU_RS23995 0.51 +0.1 5,375,316 + PFLU_RS23995 0.51 +0.1 5,375,316 + PFLU_RS23995 0.51 +0.4 5,375,316 + PFLU_RS23995 0.51 +0.3 5,375,316 + PFLU_RS23995 0.51 -0.7 5,375,316 + PFLU_RS23995 0.51 +0.9 5,375,316 + PFLU_RS23995 0.51 +1.8 5,375,317 - PFLU_RS23995 0.51 -0.1 5,375,317 - PFLU_RS23995 0.51 +0.9 5,375,317 - PFLU_RS23995 0.51 -0.6 5,375,317 - PFLU_RS23995 0.51 +0.9 5,375,317 - PFLU_RS23995 0.51 -0.9 5,375,317 - PFLU_RS23995 0.51 +0.1 5,375,317 - PFLU_RS23995 0.51 +0.8 5,375,317 - PFLU_RS23995 0.51 -1.8 5,375,317 - PFLU_RS23995 0.51 -0.4 5,375,317 - PFLU_RS23995 0.51 -0.5 5,375,317 - PFLU_RS23995 0.51 -0.4 5,375,317 - PFLU_RS23995 0.51 -1.1 5,375,317 - PFLU_RS23995 0.51 +1.1 5,375,317 - PFLU_RS23995 0.51 +0.4 5,375,317 - PFLU_RS23995 0.51 +0.4 5,375,317 - PFLU_RS23995 0.51 +0.6 5,375,317 - PFLU_RS23995 0.51 +0.3 5,375,317 - PFLU_RS23995 0.51 +1.1 5,375,317 - PFLU_RS23995 0.51 -0.7 5,375,317 - PFLU_RS23995 0.51 +0.5 5,375,317 - PFLU_RS23995 0.51 -0.2 5,375,317 - PFLU_RS23995 0.51 -0.8 5,375,317 - PFLU_RS23995 0.51 +1.8 5,375,317 - PFLU_RS23995 0.51 -0.7 5,375,317 - PFLU_RS23995 0.51 +1.6 5,375,317 - PFLU_RS23995 0.51 +1.6 5,375,317 - PFLU_RS23995 0.51 +0.4 5,375,447 + PFLU_RS23995 0.85 +0.8 5,375,469 + +0.3 5,375,469 + +0.2 5,375,470 - -0.9 5,375,470 - +0.2 5,375,523 + -0.3 5,375,533 - -0.1 5,375,755 + -2.4 5,375,755 + +0.5 5,375,755 + +0.9 5,375,755 + -0.3 5,375,755 + -1.4 5,375,755 + -0.6 5,375,756 - +0.6 5,375,756 - -1.7 5,375,756 - -1.9 5,375,756 - -0.4 5,375,756 - -0.2 5,375,756 - +0.4 5,375,756 - -3.1 5,375,756 - +0.2 5,375,756 - +0.6 5,375,770 + -0.7 5,375,770 + -0.4 5,375,770 + -0.8 5,375,770 + +0.8 5,375,770 + -1.2 5,375,771 - +1.5 5,375,771 - -0.4 5,375,771 - -1.3 5,375,771 - -0.9 5,375,773 + +3.0 5,375,773 + +0.1 5,375,773 + -0.4 5,375,773 + -1.3 5,375,773 + -1.6 5,375,773 + +0.6 5,375,773 + -0.0 5,375,773 + +0.8 5,375,773 + -3.1 5,375,774 - -0.9 5,375,774 - -1.5 5,375,774 - -1.0 5,375,774 - -1.2 5,375,774 - -0.3 5,375,774 - -0.9 5,375,774 - -0.2 5,375,774 - -2.1 5,375,774 - +1.2 5,375,774 - +0.5 5,375,796 + -1.7 5,375,830 + PFLU_RS24000 0.11 -1.1 5,375,839 + PFLU_RS24000 0.11 +0.2 5,375,839 + PFLU_RS24000 0.11 -0.8 5,375,839 + PFLU_RS24000 0.11 +0.4 5,375,839 + PFLU_RS24000 0.11 -2.3 5,375,839 + PFLU_RS24000 0.11 -2.1 5,375,840 - PFLU_RS24000 0.11 +1.2 5,375,840 - PFLU_RS24000 0.11 -0.8 5,375,849 - PFLU_RS24000 0.12 +0.6 5,376,090 + PFLU_RS24000 0.20 -1.4 5,376,160 + PFLU_RS24000 0.23 -1.5 5,376,361 + PFLU_RS24000 0.30 -1.9 5,376,361 + PFLU_RS24000 0.30 -0.8 5,376,361 + PFLU_RS24000 0.30 -2.5 5,376,361 + PFLU_RS24000 0.30 -1.5 5,376,362 - PFLU_RS24000 0.30 -0.2 5,376,362 - PFLU_RS24000 0.30 +1.6 5,376,477 + PFLU_RS24000 0.34 -0.8 5,376,477 + PFLU_RS24000 0.34 +2.5 5,376,477 + PFLU_RS24000 0.34 +0.1 5,376,477 + PFLU_RS24000 0.34 +0.9 5,376,477 + PFLU_RS24000 0.34 -1.9 5,376,478 - PFLU_RS24000 0.34 -1.3 5,376,478 - PFLU_RS24000 0.34 +0.1 5,376,478 - PFLU_RS24000 0.34 -1.7 5,376,478 - PFLU_RS24000 0.34 +0.2 5,376,478 - PFLU_RS24000 0.34 -0.2 5,376,478 - PFLU_RS24000 0.34 -1.9 5,376,478 - PFLU_RS24000 0.34 +1.3 5,376,478 - PFLU_RS24000 0.34 -0.2
Or see this region's nucleotide sequence