Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_482 and Ac3H11_483 are separated by 55 nucleotides Ac3H11_483 and Ac3H11_484 are separated by 48 nucleotides Ac3H11_484 and Ac3H11_485 are separated by 68 nucleotides Ac3H11_485 and Ac3H11_486 are separated by 30 nucleotides
Ac3H11_482 - RND multidrug efflux transporter; Acriflavin resistance protein, at 178,045 to 181,206
_482
Ac3H11_483 - Thioredoxin, at 181,262 to 181,594
_483
Ac3H11_484 - Molybdopterin biosynthesis protein MoeA, at 181,643 to 183,010
_484
Ac3H11_485 - GCN5-related N-acetyltransferase, at 183,079 to 183,678
_485
Ac3H11_486 - Molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 183,709 to 184,347
_486
Position (kb) 181
182
183
184 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 180.808 kb on + strand, within Ac3H11_482 at 180.951 kb on + strand at 180.951 kb on + strand at 180.951 kb on + strand at 180.952 kb on - strand at 180.952 kb on - strand at 180.952 kb on - strand at 181.059 kb on + strand at 181.059 kb on + strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.204 kb on + strand at 181.204 kb on + strand at 181.205 kb on - strand at 181.205 kb on - strand at 181.223 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.252 kb on + strand at 181.253 kb on - strand at 181.253 kb on - strand at 181.322 kb on + strand, within Ac3H11_483 at 181.587 kb on + strand at 181.594 kb on + strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.828 kb on - strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 182.026 kb on + strand, within Ac3H11_484 at 182.029 kb on - strand, within Ac3H11_484 at 182.338 kb on - strand, within Ac3H11_484 at 182.352 kb on + strand, within Ac3H11_484 at 182.352 kb on + strand, within Ac3H11_484 at 182.412 kb on + strand, within Ac3H11_484 at 182.413 kb on - strand, within Ac3H11_484 at 182.418 kb on - strand, within Ac3H11_484 at 182.796 kb on + strand, within Ac3H11_484 at 182.796 kb on + strand, within Ac3H11_484 at 182.797 kb on - strand, within Ac3H11_484 at 182.970 kb on + strand at 182.970 kb on + strand at 182.970 kb on + strand at 182.971 kb on - strand at 182.971 kb on - strand at 183.080 kb on + strand at 183.080 kb on + strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.144 kb on - strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.210 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.508 kb on + strand, within Ac3H11_485 at 183.509 kb on - strand, within Ac3H11_485 at 183.521 kb on + strand, within Ac3H11_485 at 183.521 kb on + strand, within Ac3H11_485 at 183.522 kb on - strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.928 kb on + strand, within Ac3H11_486
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 180,808 + Ac3H11_482 0.87 +1.0 180,951 + -1.4 180,951 + -0.7 180,951 + -0.4 180,952 - -0.1 180,952 - +1.1 180,952 - +0.3 181,059 + -0.4 181,059 + -0.1 181,060 - +1.2 181,060 - +0.7 181,060 - -3.1 181,060 - -2.4 181,060 - -0.7 181,105 + +2.0 181,105 + +0.4 181,105 + +0.2 181,105 + +0.8 181,105 + -1.1 181,105 + -2.0 181,105 + +0.8 181,106 - -0.0 181,106 - +2.0 181,106 - -1.1 181,106 - -1.9 181,106 - -0.3 181,106 - -1.0 181,106 - -1.2 181,106 - +0.2 181,106 - +0.0 181,106 - -1.3 181,106 - -0.4 181,106 - +0.7 181,106 - +0.4 181,106 - -0.3 181,106 - -3.4 181,106 - -0.1 181,192 + +0.6 181,192 + +0.4 181,192 + +3.5 181,192 + +1.2 181,192 + +1.4 181,192 + -1.6 181,193 - +0.9 181,193 - +0.4 181,193 - -0.1 181,193 - -1.1 181,193 - -0.0 181,204 + -0.8 181,204 + -0.5 181,205 - -0.1 181,205 - +0.1 181,223 + +0.9 181,249 + -0.5 181,249 + -2.1 181,249 + +1.2 181,249 + -0.1 181,249 + +1.0 181,249 + -2.4 181,249 + -2.4 181,249 + +2.0 181,249 + -1.7 181,250 - +1.0 181,250 - +2.8 181,250 - -0.7 181,250 - +0.2 181,250 - -0.8 181,250 - -1.0 181,250 - -1.6 181,250 - +0.9 181,250 - -2.4 181,250 - +1.8 181,250 - +1.8 181,250 - +0.6 181,250 - +0.9 181,252 + +0.7 181,253 - -0.1 181,253 - +2.2 181,322 + Ac3H11_483 0.18 +1.4 181,587 + -2.8 181,594 + -0.9 181,595 - -3.8 181,595 - +2.7 181,595 - +0.6 181,595 - +0.5 181,827 + Ac3H11_484 0.13 +0.7 181,827 + Ac3H11_484 0.13 -0.5 181,827 + Ac3H11_484 0.13 +0.7 181,828 - Ac3H11_484 0.14 +0.5 181,931 + Ac3H11_484 0.21 -0.7 181,931 + Ac3H11_484 0.21 -1.0 181,931 + Ac3H11_484 0.21 -0.1 181,931 + Ac3H11_484 0.21 -0.3 181,932 - Ac3H11_484 0.21 +0.7 181,932 - Ac3H11_484 0.21 -2.3 182,026 + Ac3H11_484 0.28 -1.1 182,029 - Ac3H11_484 0.28 +1.6 182,338 - Ac3H11_484 0.51 +0.2 182,352 + Ac3H11_484 0.52 -0.2 182,352 + Ac3H11_484 0.52 +0.8 182,412 + Ac3H11_484 0.56 -3.2 182,413 - Ac3H11_484 0.56 -1.1 182,418 - Ac3H11_484 0.57 -0.8 182,796 + Ac3H11_484 0.84 +1.3 182,796 + Ac3H11_484 0.84 -1.0 182,797 - Ac3H11_484 0.84 +0.8 182,970 + +0.1 182,970 + +0.3 182,970 + -0.3 182,971 - +0.4 182,971 - -0.0 183,080 + +0.5 183,080 + -0.1 183,081 - -2.4 183,081 - -1.2 183,081 - +1.8 183,081 - -0.8 183,081 - -2.6 183,143 + Ac3H11_485 0.11 +0.6 183,143 + Ac3H11_485 0.11 +0.7 183,143 + Ac3H11_485 0.11 +0.4 183,143 + Ac3H11_485 0.11 -0.4 183,144 - Ac3H11_485 0.11 -0.2 183,209 + Ac3H11_485 0.22 +0.9 183,209 + Ac3H11_485 0.22 +0.8 183,209 + Ac3H11_485 0.22 +0.9 183,210 - Ac3H11_485 0.22 -2.8 183,272 - Ac3H11_485 0.32 -1.3 183,272 - Ac3H11_485 0.32 -0.5 183,272 - Ac3H11_485 0.32 +0.5 183,488 + Ac3H11_485 0.68 -0.7 183,488 + Ac3H11_485 0.68 +1.1 183,488 + Ac3H11_485 0.68 -1.1 183,488 + Ac3H11_485 0.68 -2.3 183,488 + Ac3H11_485 0.68 +1.6 183,488 + Ac3H11_485 0.68 +0.3 183,488 + Ac3H11_485 0.68 +1.9 183,489 - Ac3H11_485 0.68 +0.2 183,489 - Ac3H11_485 0.68 +2.4 183,489 - Ac3H11_485 0.68 -0.1 183,489 - Ac3H11_485 0.68 -1.1 183,489 - Ac3H11_485 0.68 -0.3 183,508 + Ac3H11_485 0.71 +0.5 183,509 - Ac3H11_485 0.72 +0.6 183,521 + Ac3H11_485 0.74 -1.9 183,521 + Ac3H11_485 0.74 +0.8 183,522 - Ac3H11_485 0.74 +1.2 183,578 + Ac3H11_485 0.83 +0.8 183,578 + Ac3H11_485 0.83 +0.7 183,578 + Ac3H11_485 0.83 -1.0 183,578 + Ac3H11_485 0.83 -1.0 183,578 + Ac3H11_485 0.83 -0.4 183,578 + Ac3H11_485 0.83 -0.3 183,578 + Ac3H11_485 0.83 -1.2 183,578 + Ac3H11_485 0.83 +1.7 183,579 - Ac3H11_485 0.83 -2.2 183,579 - Ac3H11_485 0.83 +0.2 183,579 - Ac3H11_485 0.83 +0.1 183,928 + Ac3H11_486 0.34 +1.3
Or see this region's nucleotide sequence