Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4735 and Ac3H11_4736 are separated by 6 nucleotides Ac3H11_4736 and Ac3H11_4737 overlap by 4 nucleotides Ac3H11_4737 and Ac3H11_4738 overlap by 8 nucleotides
Ac3H11_4735 - Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19), at 42,520 to 42,909
_4735
Ac3H11_4736 - Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31), at 42,916 to 43,290
_4736
Ac3H11_4737 - Probable transmembrane protein, at 43,287 to 43,673
_4737
Ac3H11_4738 - Ferredoxin reductase, at 43,666 to 44,715
_4738
Position (kb) 43
44 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6 at 42.312 kb on + strand at 42.312 kb on + strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.316 kb on + strand at 42.317 kb on - strand at 42.317 kb on - strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.901 kb on + strand at 42.907 kb on + strand at 42.907 kb on + strand at 42.907 kb on + strand at 42.907 kb on + strand at 42.907 kb on + strand at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.359 kb on + strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.360 kb on - strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.536 kb on + strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.537 kb on - strand, within Ac3H11_4737 at 43.617 kb on + strand, within Ac3H11_4737 at 43.692 kb on + strand at 43.692 kb on + strand at 44.030 kb on - strand, within Ac3H11_4738 at 44.049 kb on + strand, within Ac3H11_4738 at 44.129 kb on + strand, within Ac3H11_4738 at 44.278 kb on + strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.518 kb on + strand, within Ac3H11_4738
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 42,312 + +0.5 42,312 + +1.3 42,313 - -3.1 42,313 - -0.1 42,313 - -2.0 42,316 + +0.1 42,317 - +1.5 42,317 - +1.7 42,901 + -0.1 42,901 + +1.4 42,901 + +5.8 42,901 + -1.6 42,901 + +1.9 42,901 + -0.3 42,901 + +2.9 42,901 + -0.2 42,907 + +0.2 42,907 + +0.5 42,907 + +1.7 42,907 + -0.3 42,907 + +0.6 43,359 + Ac3H11_4737 0.19 -1.3 43,359 + Ac3H11_4737 0.19 +1.0 43,359 + Ac3H11_4737 0.19 +1.5 43,359 + Ac3H11_4737 0.19 +1.7 43,359 + Ac3H11_4737 0.19 +0.4 43,359 + Ac3H11_4737 0.19 -1.2 43,359 + Ac3H11_4737 0.19 -0.8 43,359 + Ac3H11_4737 0.19 -1.7 43,359 + Ac3H11_4737 0.19 -2.6 43,359 + Ac3H11_4737 0.19 -3.3 43,359 + Ac3H11_4737 0.19 -2.1 43,359 + Ac3H11_4737 0.19 +2.3 43,359 + Ac3H11_4737 0.19 +1.0 43,359 + Ac3H11_4737 0.19 +1.5 43,359 + Ac3H11_4737 0.19 -2.5 43,359 + Ac3H11_4737 0.19 +1.7 43,359 + Ac3H11_4737 0.19 -1.6 43,359 + Ac3H11_4737 0.19 -2.7 43,359 + Ac3H11_4737 0.19 -4.1 43,360 - Ac3H11_4737 0.19 -0.1 43,360 - Ac3H11_4737 0.19 -2.1 43,360 - Ac3H11_4737 0.19 +1.0 43,360 - Ac3H11_4737 0.19 -0.0 43,360 - Ac3H11_4737 0.19 +1.2 43,360 - Ac3H11_4737 0.19 +0.3 43,360 - Ac3H11_4737 0.19 +0.5 43,360 - Ac3H11_4737 0.19 +0.1 43,360 - Ac3H11_4737 0.19 +1.2 43,360 - Ac3H11_4737 0.19 -1.2 43,360 - Ac3H11_4737 0.19 -0.1 43,360 - Ac3H11_4737 0.19 -0.6 43,360 - Ac3H11_4737 0.19 +0.1 43,360 - Ac3H11_4737 0.19 -0.5 43,360 - Ac3H11_4737 0.19 -2.5 43,360 - Ac3H11_4737 0.19 +1.6 43,360 - Ac3H11_4737 0.19 -0.1 43,360 - Ac3H11_4737 0.19 -1.2 43,360 - Ac3H11_4737 0.19 -2.9 43,536 + Ac3H11_4737 0.64 +2.0 43,536 + Ac3H11_4737 0.64 -0.1 43,536 + Ac3H11_4737 0.64 +0.3 43,536 + Ac3H11_4737 0.64 -1.0 43,536 + Ac3H11_4737 0.64 +1.5 43,536 + Ac3H11_4737 0.64 +0.8 43,536 + Ac3H11_4737 0.64 +2.1 43,536 + Ac3H11_4737 0.64 -0.1 43,536 + Ac3H11_4737 0.64 -1.1 43,536 + Ac3H11_4737 0.64 -1.2 43,536 + Ac3H11_4737 0.64 +0.1 43,536 + Ac3H11_4737 0.64 -1.0 43,536 + Ac3H11_4737 0.64 -0.3 43,536 + Ac3H11_4737 0.64 +0.3 43,536 + Ac3H11_4737 0.64 +0.7 43,536 + Ac3H11_4737 0.64 -0.9 43,536 + Ac3H11_4737 0.64 -2.0 43,536 + Ac3H11_4737 0.64 -1.5 43,537 - Ac3H11_4737 0.65 +0.9 43,537 - Ac3H11_4737 0.65 -0.9 43,537 - Ac3H11_4737 0.65 +1.3 43,537 - Ac3H11_4737 0.65 -1.7 43,537 - Ac3H11_4737 0.65 +0.5 43,537 - Ac3H11_4737 0.65 +1.5 43,537 - Ac3H11_4737 0.65 -0.6 43,537 - Ac3H11_4737 0.65 -1.5 43,537 - Ac3H11_4737 0.65 +0.5 43,537 - Ac3H11_4737 0.65 -0.9 43,537 - Ac3H11_4737 0.65 -0.2 43,617 + Ac3H11_4737 0.85 -1.7 43,692 + -2.0 43,692 + -0.2 44,030 - Ac3H11_4738 0.35 -0.2 44,049 + Ac3H11_4738 0.36 -1.1 44,129 + Ac3H11_4738 0.44 -0.4 44,278 + Ac3H11_4738 0.58 -1.3 44,294 - Ac3H11_4738 0.60 -1.2 44,294 - Ac3H11_4738 0.60 +0.5 44,294 - Ac3H11_4738 0.60 -0.0 44,326 + Ac3H11_4738 0.63 +0.2 44,326 + Ac3H11_4738 0.63 -0.7 44,327 - Ac3H11_4738 0.63 -1.1 44,327 - Ac3H11_4738 0.63 -1.7 44,518 + Ac3H11_4738 0.81 -1.2
Or see this region's nucleotide sequence