Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4682 and Ac3H11_4683 are separated by 35 nucleotides Ac3H11_4683 and Ac3H11_4684 are separated by 90 nucleotides
Ac3H11_4682 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 291,691 to 292,647
_4682
Ac3H11_4683 - Holliday junction DNA helicase RuvA, at 292,683 to 293,315
_4683
Ac3H11_4684 - Lysyl endopeptidase (EC 3.4.21.50), at 293,406 to 295,322
_4684
Position (kb) 292
293
294 Strain fitness (log2 ratio) -2
-1
0
1
2 at 291.734 kb on + strand at 291.735 kb on - strand at 292.109 kb on + strand, within Ac3H11_4682 at 292.109 kb on + strand, within Ac3H11_4682 at 292.110 kb on - strand, within Ac3H11_4682 at 292.244 kb on + strand, within Ac3H11_4682 at 292.244 kb on + strand, within Ac3H11_4682 at 292.244 kb on + strand, within Ac3H11_4682 at 292.245 kb on - strand, within Ac3H11_4682 at 292.245 kb on - strand, within Ac3H11_4682 at 292.245 kb on - strand, within Ac3H11_4682 at 292.245 kb on - strand, within Ac3H11_4682 at 292.245 kb on - strand, within Ac3H11_4682 at 292.310 kb on + strand, within Ac3H11_4682 at 292.310 kb on + strand, within Ac3H11_4682 at 292.310 kb on + strand, within Ac3H11_4682 at 292.310 kb on + strand, within Ac3H11_4682 at 292.310 kb on + strand, within Ac3H11_4682 at 292.311 kb on - strand, within Ac3H11_4682 at 292.311 kb on - strand, within Ac3H11_4682 at 292.423 kb on - strand, within Ac3H11_4682 at 292.457 kb on + strand, within Ac3H11_4682 at 292.458 kb on - strand, within Ac3H11_4682 at 292.653 kb on + strand at 292.654 kb on - strand at 292.654 kb on - strand at 292.654 kb on - strand at 292.654 kb on - strand at 292.670 kb on + strand at 292.670 kb on + strand at 292.671 kb on - strand at 293.358 kb on + strand at 293.358 kb on + strand at 293.358 kb on + strand at 293.363 kb on + strand at 293.363 kb on + strand at 293.363 kb on + strand at 293.364 kb on - strand at 293.364 kb on - strand at 293.364 kb on - strand at 293.364 kb on - strand at 293.399 kb on + strand at 293.399 kb on + strand at 293.859 kb on + strand, within Ac3H11_4684 at 293.859 kb on + strand, within Ac3H11_4684 at 293.859 kb on + strand, within Ac3H11_4684 at 293.859 kb on + strand, within Ac3H11_4684 at 293.895 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 293.945 kb on + strand, within Ac3H11_4684 at 294.095 kb on + strand, within Ac3H11_4684 at 294.095 kb on + strand, within Ac3H11_4684 at 294.095 kb on + strand, within Ac3H11_4684 at 294.152 kb on + strand, within Ac3H11_4684 at 294.152 kb on + strand, within Ac3H11_4684 at 294.159 kb on + strand, within Ac3H11_4684 at 294.159 kb on + strand, within Ac3H11_4684 at 294.159 kb on + strand, within Ac3H11_4684 at 294.159 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.225 kb on + strand, within Ac3H11_4684 at 294.272 kb on - strand, within Ac3H11_4684 at 294.276 kb on + strand, within Ac3H11_4684 at 294.276 kb on + strand, within Ac3H11_4684
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 291,734 + +2.5 291,735 - -2.1 292,109 + Ac3H11_4682 0.44 +0.5 292,109 + Ac3H11_4682 0.44 +2.5 292,110 - Ac3H11_4682 0.44 +0.4 292,244 + Ac3H11_4682 0.58 +1.3 292,244 + Ac3H11_4682 0.58 -1.3 292,244 + Ac3H11_4682 0.58 -1.6 292,245 - Ac3H11_4682 0.58 -0.0 292,245 - Ac3H11_4682 0.58 -0.1 292,245 - Ac3H11_4682 0.58 -0.2 292,245 - Ac3H11_4682 0.58 +0.5 292,245 - Ac3H11_4682 0.58 +2.2 292,310 + Ac3H11_4682 0.65 -1.6 292,310 + Ac3H11_4682 0.65 +0.1 292,310 + Ac3H11_4682 0.65 -0.9 292,310 + Ac3H11_4682 0.65 -0.5 292,310 + Ac3H11_4682 0.65 +1.0 292,311 - Ac3H11_4682 0.65 +0.0 292,311 - Ac3H11_4682 0.65 +0.5 292,423 - Ac3H11_4682 0.76 -0.7 292,457 + Ac3H11_4682 0.80 +2.4 292,458 - Ac3H11_4682 0.80 +0.6 292,653 + -0.1 292,654 - +0.9 292,654 - -0.5 292,654 - +1.6 292,654 - +0.1 292,670 + -0.0 292,670 + +0.7 292,671 - -1.7 293,358 + -1.0 293,358 + -0.3 293,358 + +0.7 293,363 + +1.2 293,363 + -0.8 293,363 + +2.7 293,364 - +0.3 293,364 - +0.5 293,364 - +0.5 293,364 - +2.2 293,399 + -0.1 293,399 + +1.9 293,859 + Ac3H11_4684 0.24 +1.0 293,859 + Ac3H11_4684 0.24 +0.9 293,859 + Ac3H11_4684 0.24 +2.4 293,859 + Ac3H11_4684 0.24 -0.9 293,895 + Ac3H11_4684 0.26 +2.6 293,945 + Ac3H11_4684 0.28 +0.5 293,945 + Ac3H11_4684 0.28 +1.0 293,945 + Ac3H11_4684 0.28 +0.0 293,945 + Ac3H11_4684 0.28 +0.6 293,945 + Ac3H11_4684 0.28 +0.3 293,945 + Ac3H11_4684 0.28 -1.3 293,945 + Ac3H11_4684 0.28 +1.0 293,945 + Ac3H11_4684 0.28 -0.9 293,945 + Ac3H11_4684 0.28 +0.5 294,095 + Ac3H11_4684 0.36 -0.2 294,095 + Ac3H11_4684 0.36 -0.2 294,095 + Ac3H11_4684 0.36 +0.4 294,152 + Ac3H11_4684 0.39 -0.1 294,152 + Ac3H11_4684 0.39 +0.2 294,159 + Ac3H11_4684 0.39 +2.1 294,159 + Ac3H11_4684 0.39 +0.1 294,159 + Ac3H11_4684 0.39 +0.9 294,159 + Ac3H11_4684 0.39 -2.0 294,225 + Ac3H11_4684 0.43 -0.8 294,225 + Ac3H11_4684 0.43 -0.8 294,225 + Ac3H11_4684 0.43 -2.5 294,225 + Ac3H11_4684 0.43 +0.6 294,225 + Ac3H11_4684 0.43 -0.4 294,225 + Ac3H11_4684 0.43 +1.4 294,272 - Ac3H11_4684 0.45 +0.1 294,276 + Ac3H11_4684 0.45 -2.3 294,276 + Ac3H11_4684 0.45 +2.5
Or see this region's nucleotide sequence