Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2078 and Ac3H11_2079 are separated by 123 nucleotides Ac3H11_2079 and Ac3H11_2080 are separated by 178 nucleotides Ac3H11_2080 and Ac3H11_2081 are separated by 593 nucleotides
Ac3H11_2078 - D-mannose isomerase (EC 5.3.1.7) <small>(from data)</small>, at 303,500 to 304,774
_2078
Ac3H11_2079 - Membrane protein TerC, possibly involved in tellurium resistance, at 304,898 to 305,584
_2079
Ac3H11_2080 - hypothetical protein, at 305,763 to 305,879
_2080
Ac3H11_2081 - Gluconolactonase (EC 3.1.1.17), at 306,473 to 307,423
_2081
Position (kb) 305
306 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 304.816 kb on + strand at 304.817 kb on - strand at 304.949 kb on + strand at 304.950 kb on - strand at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.983 kb on + strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 304.984 kb on - strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.010 kb on + strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.011 kb on - strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.277 kb on + strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.278 kb on - strand, within Ac3H11_2079 at 305.414 kb on + strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.415 kb on - strand, within Ac3H11_2079 at 305.576 kb on + strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.585 kb on - strand at 305.585 kb on - strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.601 kb on - strand at 305.601 kb on - strand at 305.665 kb on + strand at 305.665 kb on + strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.694 kb on - strand at 305.703 kb on + strand at 305.704 kb on - strand at 305.704 kb on - strand at 305.840 kb on + strand, within Ac3H11_2080 at 305.840 kb on + strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.926 kb on + strand at 305.927 kb on - strand at 305.948 kb on - strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.967 kb on - strand at 305.967 kb on - strand at 305.967 kb on - strand at 306.072 kb on + strand at 306.073 kb on - strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.221 kb on - strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 304,816 + -1.0 304,817 - -0.8 304,949 + -0.7 304,950 - -1.8 304,983 + Ac3H11_2079 0.12 +0.2 304,983 + Ac3H11_2079 0.12 +2.0 304,983 + Ac3H11_2079 0.12 -0.1 304,983 + Ac3H11_2079 0.12 +1.3 304,983 + Ac3H11_2079 0.12 -1.0 304,983 + Ac3H11_2079 0.12 +0.7 304,983 + Ac3H11_2079 0.12 -1.2 304,983 + Ac3H11_2079 0.12 -0.8 304,984 - Ac3H11_2079 0.13 -0.2 304,984 - Ac3H11_2079 0.13 +0.9 304,984 - Ac3H11_2079 0.13 -0.1 304,984 - Ac3H11_2079 0.13 -1.9 304,984 - Ac3H11_2079 0.13 +3.1 304,984 - Ac3H11_2079 0.13 +0.8 305,010 + Ac3H11_2079 0.16 -1.1 305,010 + Ac3H11_2079 0.16 -1.0 305,010 + Ac3H11_2079 0.16 -0.8 305,011 - Ac3H11_2079 0.16 +1.5 305,011 - Ac3H11_2079 0.16 +0.1 305,011 - Ac3H11_2079 0.16 +0.3 305,011 - Ac3H11_2079 0.16 -2.1 305,011 - Ac3H11_2079 0.16 +0.7 305,011 - Ac3H11_2079 0.16 -0.2 305,011 - Ac3H11_2079 0.16 -1.2 305,011 - Ac3H11_2079 0.16 -0.4 305,277 + Ac3H11_2079 0.55 +0.2 305,277 + Ac3H11_2079 0.55 -0.1 305,277 + Ac3H11_2079 0.55 +0.4 305,277 + Ac3H11_2079 0.55 -1.7 305,277 + Ac3H11_2079 0.55 +1.1 305,277 + Ac3H11_2079 0.55 +0.6 305,278 - Ac3H11_2079 0.55 +3.4 305,278 - Ac3H11_2079 0.55 -1.0 305,278 - Ac3H11_2079 0.55 -1.7 305,278 - Ac3H11_2079 0.55 +2.0 305,278 - Ac3H11_2079 0.55 -1.2 305,278 - Ac3H11_2079 0.55 +0.8 305,278 - Ac3H11_2079 0.55 -2.6 305,278 - Ac3H11_2079 0.55 -1.7 305,278 - Ac3H11_2079 0.55 -2.2 305,414 + Ac3H11_2079 0.75 +0.3 305,415 - Ac3H11_2079 0.75 -1.7 305,415 - Ac3H11_2079 0.75 -1.3 305,415 - Ac3H11_2079 0.75 +0.9 305,576 + -2.6 305,577 - +1.3 305,577 - -0.9 305,577 - -2.3 305,577 - -1.6 305,577 - +0.1 305,577 - +1.1 305,585 - +0.9 305,585 - -0.4 305,600 + +0.2 305,600 + +0.6 305,600 + -0.1 305,600 + +0.7 305,600 + -1.1 305,600 + +0.6 305,601 - -0.6 305,601 - +0.7 305,665 + +0.9 305,665 + -1.2 305,666 - -2.9 305,666 - -1.7 305,666 - +0.3 305,693 + -1.3 305,693 + -1.6 305,693 + +4.7 305,693 + -1.0 305,693 + +0.7 305,694 - -0.2 305,703 + -0.2 305,704 - -1.2 305,704 - +2.2 305,840 + Ac3H11_2080 0.66 -0.5 305,840 + Ac3H11_2080 0.66 +0.5 305,841 - Ac3H11_2080 0.67 -1.7 305,841 - Ac3H11_2080 0.67 -0.3 305,841 - Ac3H11_2080 0.67 -0.8 305,841 - Ac3H11_2080 0.67 +0.2 305,858 - Ac3H11_2080 0.81 -0.4 305,858 - Ac3H11_2080 0.81 +0.2 305,858 - Ac3H11_2080 0.81 +1.1 305,870 + -2.2 305,870 + +0.2 305,870 + +0.1 305,870 + +2.8 305,871 - -2.9 305,871 - +0.6 305,871 - -1.3 305,871 - +1.3 305,871 - -2.0 305,871 - -1.2 305,926 + -3.0 305,927 - -2.4 305,948 - -1.6 305,958 + +0.3 305,958 + +0.8 305,958 + -1.1 305,958 + +0.5 305,958 + +1.3 305,958 + +4.2 305,958 + -0.4 305,958 + -0.2 305,959 - -0.9 305,959 - +5.9 305,959 - -0.9 305,959 - -1.4 305,959 - +0.3 305,966 + +2.4 305,966 + +0.8 305,966 + +0.0 305,967 - -0.2 305,967 - -0.9 305,967 - +0.4 306,072 + +1.2 306,073 - -3.3 306,076 + -0.4 306,076 + -1.8 306,076 + +2.7 306,076 + -2.2 306,076 + +4.6 306,076 + +0.6 306,076 + +1.3 306,077 - +0.1 306,077 - +0.8 306,077 - +0.4 306,077 - -0.0 306,077 - +0.0 306,077 - -3.1 306,164 + -2.0 306,164 + +0.6 306,164 + -2.4 306,164 + +1.6 306,164 + -0.6 306,164 + +0.6 306,164 + +1.1 306,164 + +1.1 306,164 + +1.8 306,164 + +3.0 306,165 - -0.6 306,165 - -1.4 306,165 - -0.1 306,165 - -2.7 306,165 - -1.6 306,165 - +0.3 306,165 - -2.0 306,165 - +1.1 306,221 - -1.0 306,272 + +1.1 306,272 + -2.7 306,272 + +0.6 306,272 + -0.2 306,272 + -1.2 306,272 + +0.3 306,273 - +1.7 306,273 - -1.4 306,273 - +0.9 306,304 + +0.4
Or see this region's nucleotide sequence