Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28025

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
6,108,737	-		AO353_28015	0.30	+0.5
6,108,780	-		AO353_28015	0.41	-0.7
6,108,831	+		AO353_28015	0.53	+0.8
6,108,832	-		AO353_28015	0.54	-1.1
6,108,925	+		AO353_28015	0.77	-0.2
6,109,015	+				-0.3
6,109,015	+				-1.1
6,109,058	+				-1.1
6,109,059	-				-0.1
6,109,074	-				+1.0
6,109,096	+				+1.0
6,109,096	+				+0.9
6,109,096	+				+0.2
6,109,097	-				-0.3
6,109,097	-				-0.2
6,109,100	+				+1.4
6,109,100	+				+0.1
6,109,101	-				-0.8
6,109,101	-				-0.1
6,109,101	-				-0.6
6,109,104	+				-0.1
6,109,105	-				+1.4
6,109,115	-				+0.4
6,109,115	-				-0.4
6,109,163	-		AO353_28020	0.18	+0.6
6,109,163	-		AO353_28020	0.18	+0.8
6,109,220	-		AO353_28020	0.32	-0.9
6,109,304	+		AO353_28020	0.53	+0.7
6,109,304	+		AO353_28020	0.53	-0.6
6,109,304	+		AO353_28020	0.53	+1.3
6,109,304	+		AO353_28020	0.53	-1.0
6,109,305	-		AO353_28020	0.53	-0.7
6,109,305	-		AO353_28020	0.53	+1.6
6,109,305	-		AO353_28020	0.53	+0.1
6,109,323	+		AO353_28020	0.58	-0.8
6,109,324	-		AO353_28020	0.58	-2.1
6,109,324	-		AO353_28020	0.58	-1.0
6,109,333	+		AO353_28020	0.60	-0.5
6,109,334	-		AO353_28020	0.60	-0.7
6,109,334	-		AO353_28020	0.60	+0.1
6,109,334	-		AO353_28020	0.60	-1.7
6,109,334	-		AO353_28020	0.60	-0.3
6,109,376	+		AO353_28020	0.71	+0.2
6,109,376	+		AO353_28020	0.71	+1.4
6,109,376	+		AO353_28020	0.71	-1.6
6,109,402	+		AO353_28020	0.77	-0.6
6,109,402	+		AO353_28020	0.77	+0.4
6,109,402	+		AO353_28020	0.77	-1.1
6,109,402	+		AO353_28020	0.77	+0.3
6,109,403	-		AO353_28020	0.78	-0.9
6,109,403	-		AO353_28020	0.78	+0.6
6,109,403	-		AO353_28020	0.78	-1.7
6,109,403	-		AO353_28020	0.78	-1.7
6,109,403	-		AO353_28020	0.78	-0.9
6,109,403	-		AO353_28020	0.78	-1.8
6,109,403	-		AO353_28020	0.78	+1.4
6,109,403	-		AO353_28020	0.78	+0.6
6,109,478	+				+0.3
6,109,478	+				+1.8
6,109,478	+				+1.1
6,109,478	+				-0.5
6,109,478	+				-0.6
6,109,478	+				-0.5
6,109,490	+				+0.4
6,109,502	+				+0.1
6,109,502	+				+0.9
6,109,502	+				-1.0
6,109,502	+				+0.4
6,109,502	+				-0.9
6,109,503	-				+0.5
6,109,503	-				-1.1
6,109,503	-				+0.0
6,109,503	-				+0.1
6,109,526	+				-0.0
6,109,526	+				+1.4
6,109,554	+				+1.9
6,109,599	-				-2.3
6,109,667	+				+0.5
6,109,667	+				+0.4
6,109,668	-				-0.8
6,109,677	+				-1.1
6,109,678	-				+0.4
6,109,700	+				-0.3
6,109,700	+				+0.7
6,109,727	+				+0.6
6,109,805	+				+1.2
6,109,811	+				-0.3
6,109,811	+				-1.1
6,109,811	+				+0.9
6,109,811	+				-0.3
6,109,812	-				+0.7
6,109,812	-				-1.7
6,109,812	-				+1.0
6,109,812	-				-0.9
6,109,812	-				+0.9
6,109,842	+		AO353_28025	0.11	-0.9
6,109,842	+		AO353_28025	0.11	-0.6
6,109,842	+		AO353_28025	0.11	-1.9
6,109,842	+		AO353_28025	0.11	+0.2
6,109,843	-		AO353_28025	0.11	+0.7
6,109,843	-		AO353_28025	0.11	+0.1
6,109,843	-		AO353_28025	0.11	+0.4
6,109,859	+		AO353_28025	0.12	-1.6
6,109,860	-		AO353_28025	0.12	+1.4
6,109,955	-		AO353_28025	0.22	-0.9
6,109,977	+		AO353_28025	0.24	+1.4
6,110,018	+		AO353_28025	0.28	+0.4
6,110,018	+		AO353_28025	0.28	-0.6
6,110,018	+		AO353_28025	0.28	-0.8
6,110,018	+		AO353_28025	0.28	-0.2
6,110,018	+		AO353_28025	0.28	-1.4
6,110,019	-		AO353_28025	0.28	+0.6
6,110,019	-		AO353_28025	0.28	+0.5
6,110,019	-		AO353_28025	0.28	+1.0
6,110,094	+		AO353_28025	0.35	-3.1
6,110,094	+		AO353_28025	0.35	-0.3
6,110,094	+		AO353_28025	0.35	-0.6
6,110,094	+		AO353_28025	0.35	-0.1
6,110,094	+		AO353_28025	0.35	-0.3
6,110,094	+		AO353_28025	0.35	-0.1
6,110,095	-		AO353_28025	0.35	+1.4
6,110,095	-		AO353_28025	0.35	-0.1
6,110,095	-				+2.0
6,110,095	-		AO353_28025	0.35	+1.1
6,110,095	-		AO353_28025	0.35	-1.1
6,110,097	+		AO353_28025	0.35	+1.4
6,110,097	+		AO353_28025	0.35	+0.4
6,110,097	+		AO353_28025	0.35	+1.4
6,110,097	+		AO353_28025	0.35	+1.1
6,110,098	-		AO353_28025	0.35	-1.4
6,110,098	-		AO353_28025	0.35	+0.2
6,110,098	-		AO353_28025	0.35	-1.6
6,110,098	-		AO353_28025	0.35	-1.3
6,110,098	-		AO353_28025	0.35	+0.4
6,110,098	-		AO353_28025	0.35	-0.4
6,110,098	-		AO353_28025	0.35	-2.0
6,110,193	+		AO353_28025	0.45	-0.5
6,110,193	+		AO353_28025	0.45	-0.8
6,110,338	+		AO353_28025	0.59	+0.1
6,110,338	+		AO353_28025	0.59	+0.4
6,110,338	+		AO353_28025	0.59	-2.0
6,110,339	-		AO353_28025	0.59	-1.6
6,110,391	+		AO353_28025	0.64	+0.3
6,110,392	-		AO353_28025	0.64	-0.2
6,110,392	-		AO353_28025	0.64	+0.7
6,110,392	-		AO353_28025	0.64	-1.9
6,110,434	+		AO353_28025	0.68	-0.7
6,110,745	+				-1.1
6,110,746	-				-0.4
6,110,758	+				-2.4
6,110,758	+				+2.4
6,110,758	+				+0.7
6,110,759	-				-0.1
6,110,759	-				-0.6
6,110,759	-				+0.7
6,110,802	-				-0.3
6,110,829	-				+1.1
6,110,922	+				+0.9
6,110,937	+				-0.8
6,110,937	+				-1.5
6,110,938	-				+0.1
6,110,938	-				-0.8
6,110,988	+				-0.4
6,110,988	+				-0.1
6,110,988	+				-0.1
6,110,989	-				+1.9
6,110,989	-				+0.0
6,111,022	-				-0.6
6,111,022	-				+1.4
6,111,022	-				+0.5
6,111,022	-				+0.2
6,111,022	-				-1.6
6,111,080	+				-0.1
6,111,080	+				+0.4
6,111,080	+				+0.1
6,111,080	+				+1.4
6,111,080	+				-0.4
6,111,081	-				-1.6
6,111,100	-				+0.3
6,111,100	-				+1.7
6,111,176	+				+0.6
6,111,179	+				-1.4
6,111,180	-				-0.4
6,111,211	+		AO353_28030	0.16	-0.3
6,111,264	-		AO353_28030	0.28	-0.6
6,111,264	-		AO353_28030	0.28	+0.6
6,111,269	+		AO353_28030	0.30	+0.4
6,111,291	-		AO353_28030	0.35	-0.6
6,111,314	+		AO353_28030	0.41	-0.9
6,111,314	+		AO353_28030	0.41	-0.4
6,111,315	-				+0.9
6,111,315	-		AO353_28030	0.41	+0.1
6,111,321	+		AO353_28030	0.42	-1.7
6,111,322	-		AO353_28030	0.43	-0.5
6,111,359	+		AO353_28030	0.52	+1.4
6,111,368	+		AO353_28030	0.54	-2.5
6,111,368	+		AO353_28030	0.54	+0.0
6,111,368	+		AO353_28030	0.54	+0.9
6,111,410	+		AO353_28030	0.64	+1.0
6,111,411	-		AO353_28030	0.64	-0.1
6,111,472	+		AO353_28030	0.79	-1.4
6,111,499	-		AO353_28030	0.86	-0.0
6,111,499	-		AO353_28030	0.86	+0.1
6,111,499	-		AO353_28030	0.86	+0.7
6,111,584	-				-0.3
6,111,586	+				-0.9
6,111,587	-				-0.1
6,111,624	+				+1.1
6,111,624	+				+0.3
6,111,624	+				-0.1
6,111,625	-				-1.1
6,111,625	-				-0.9
6,111,650	+				-1.1
6,111,681	-				-1.4
6,111,730	+				-0.4
6,111,734	+				+0.5
6,111,734	+				+2.0
6,111,734	+				-0.4
6,111,749	+				+0.4
6,111,762	+				-2.1
6,111,762	+				+0.2
6,111,762	+				+0.6
6,111,762	+				+0.4