Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27295 and AO353_27300 overlap by 4 nucleotides AO353_27300 and AO353_27305 are separated by 1 nucleotides AO353_27305 and AO353_27310 overlap by 4 nucleotides
AO353_27295: AO353_27295 - phage tail protein, at 5,968,970 to 5,970,502
_27295
AO353_27300: AO353_27300 - phage tail protein, at 5,970,499 to 5,971,104
_27300
AO353_27305: AO353_27305 - baseplate assembly protein, at 5,971,106 to 5,971,987
_27305
AO353_27310: AO353_27310 - phage baseplate protein, at 5,971,984 to 5,972,310
_27310
Position (kb)
5970
5971
5972 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5969.617 kb on + strand, within AO353_27295 at 5969.714 kb on - strand, within AO353_27295 at 5969.792 kb on + strand, within AO353_27295 at 5969.792 kb on + strand, within AO353_27295 at 5969.792 kb on + strand, within AO353_27295 at 5969.792 kb on + strand, within AO353_27295 at 5969.792 kb on + strand, within AO353_27295 at 5969.865 kb on + strand, within AO353_27295 at 5969.865 kb on + strand, within AO353_27295 at 5969.865 kb on + strand, within AO353_27295 at 5969.865 kb on + strand, within AO353_27295 at 5969.866 kb on - strand, within AO353_27295 at 5969.866 kb on - strand, within AO353_27295 at 5969.866 kb on - strand, within AO353_27295 at 5970.012 kb on + strand, within AO353_27295 at 5970.012 kb on + strand, within AO353_27295 at 5970.012 kb on + strand, within AO353_27295 at 5970.012 kb on + strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.013 kb on - strand, within AO353_27295 at 5970.213 kb on + strand, within AO353_27295 at 5970.213 kb on + strand, within AO353_27295 at 5970.259 kb on + strand, within AO353_27295 at 5970.466 kb on + strand at 5970.467 kb on - strand at 5970.506 kb on + strand at 5970.506 kb on + strand at 5970.506 kb on + strand at 5970.506 kb on + strand at 5970.507 kb on - strand at 5970.507 kb on - strand at 5970.507 kb on - strand at 5970.507 kb on - strand at 5970.524 kb on - strand at 5970.615 kb on - strand, within AO353_27300 at 5970.742 kb on - strand, within AO353_27300 at 5970.817 kb on - strand, within AO353_27300 at 5970.830 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.890 kb on + strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.891 kb on - strand, within AO353_27300 at 5970.893 kb on + strand, within AO353_27300 at 5970.893 kb on + strand, within AO353_27300 at 5970.893 kb on + strand, within AO353_27300 at 5970.893 kb on + strand, within AO353_27300 at 5970.893 kb on + strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5970.894 kb on - strand, within AO353_27300 at 5971.010 kb on + strand, within AO353_27300 at 5971.010 kb on + strand, within AO353_27300 at 5971.010 kb on + strand, within AO353_27300 at 5971.010 kb on + strand, within AO353_27300 at 5971.011 kb on - strand, within AO353_27300 at 5971.093 kb on + strand at 5971.094 kb on - strand at 5971.094 kb on - strand at 5971.128 kb on + strand at 5971.129 kb on - strand at 5971.412 kb on + strand, within AO353_27305 at 5971.413 kb on - strand, within AO353_27305 at 5971.502 kb on - strand, within AO353_27305 at 5971.502 kb on - strand, within AO353_27305 at 5971.506 kb on + strand, within AO353_27305 at 5971.506 kb on + strand, within AO353_27305 at 5971.506 kb on + strand, within AO353_27305 at 5971.506 kb on + strand, within AO353_27305 at 5971.506 kb on + strand, within AO353_27305 at 5971.507 kb on - strand, within AO353_27305 at 5971.507 kb on - strand, within AO353_27305 at 5971.507 kb on - strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.575 kb on + strand, within AO353_27305 at 5971.576 kb on - strand, within AO353_27305 at 5971.576 kb on - strand, within AO353_27305 at 5971.576 kb on - strand, within AO353_27305 at 5971.576 kb on - strand, within AO353_27305 at 5971.576 kb on - strand, within AO353_27305 at 5971.611 kb on + strand, within AO353_27305 at 5971.612 kb on - strand, within AO353_27305 at 5971.612 kb on - strand, within AO353_27305 at 5971.751 kb on + strand, within AO353_27305 at 5971.752 kb on - strand, within AO353_27305 at 5971.752 kb on - strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.818 kb on + strand, within AO353_27305 at 5971.819 kb on - strand, within AO353_27305 at 5971.819 kb on - strand, within AO353_27305 at 5971.819 kb on - strand at 5971.819 kb on - strand, within AO353_27305 at 5971.819 kb on - strand, within AO353_27305 at 5971.819 kb on - strand, within AO353_27305 at 5971.819 kb on - strand, within AO353_27305 at 5971.887 kb on + strand, within AO353_27305 at 5971.887 kb on + strand, within AO353_27305 at 5971.887 kb on + strand, within AO353_27305 at 5971.888 kb on - strand, within AO353_27305 at 5971.917 kb on + strand at 5971.917 kb on + strand at 5971.917 kb on + strand at 5971.917 kb on + strand at 5971.917 kb on + strand at 5971.918 kb on - strand at 5971.918 kb on - strand at 5971.981 kb on + strand at 5971.981 kb on + strand at 5971.987 kb on + strand at 5971.987 kb on + strand at 5971.987 kb on + strand at 5971.988 kb on - strand at 5971.988 kb on - strand at 5971.994 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.008 vol% remove 5,969,617 + AO353_27295 0.42 +0.4 5,969,714 - AO353_27295 0.49 -1.6 5,969,792 + AO353_27295 0.54 +0.4 5,969,792 + AO353_27295 0.54 +0.6 5,969,792 + AO353_27295 0.54 +0.6 5,969,792 + AO353_27295 0.54 -1.1 5,969,792 + AO353_27295 0.54 +0.2 5,969,865 + AO353_27295 0.58 -0.1 5,969,865 + AO353_27295 0.58 +0.0 5,969,865 + AO353_27295 0.58 +0.3 5,969,865 + AO353_27295 0.58 +0.6 5,969,866 - AO353_27295 0.58 -0.4 5,969,866 - AO353_27295 0.58 -0.0 5,969,866 - AO353_27295 0.58 -1.8 5,970,012 + AO353_27295 0.68 +0.4 5,970,012 + AO353_27295 0.68 +0.4 5,970,012 + AO353_27295 0.68 -0.5 5,970,012 + AO353_27295 0.68 -1.4 5,970,013 - AO353_27295 0.68 -0.1 5,970,013 - AO353_27295 0.68 +1.9 5,970,013 - AO353_27295 0.68 +0.7 5,970,013 - AO353_27295 0.68 +0.1 5,970,013 - AO353_27295 0.68 -1.9 5,970,013 - AO353_27295 0.68 -0.6 5,970,213 + AO353_27295 0.81 +1.6 5,970,213 + AO353_27295 0.81 -1.6 5,970,259 + AO353_27295 0.84 -1.0 5,970,466 + -1.1 5,970,467 - -0.2 5,970,506 + +0.7 5,970,506 + -0.5 5,970,506 + +0.6 5,970,506 + -0.1 5,970,507 - +0.3 5,970,507 - +0.6 5,970,507 - -0.7 5,970,507 - +0.3 5,970,524 - -0.6 5,970,615 - AO353_27300 0.19 -0.6 5,970,742 - AO353_27300 0.40 -2.0 5,970,817 - AO353_27300 0.52 -1.5 5,970,830 + AO353_27300 0.55 -0.0 5,970,890 + AO353_27300 0.65 -0.1 5,970,890 + AO353_27300 0.65 +0.4 5,970,890 + AO353_27300 0.65 -0.2 5,970,890 + AO353_27300 0.65 -0.1 5,970,890 + AO353_27300 0.65 -1.4 5,970,890 + AO353_27300 0.65 +1.0 5,970,890 + AO353_27300 0.65 -0.1 5,970,890 + AO353_27300 0.65 -0.3 5,970,890 + AO353_27300 0.65 -0.6 5,970,890 + AO353_27300 0.65 +0.6 5,970,891 - AO353_27300 0.65 -1.1 5,970,891 - AO353_27300 0.65 -1.7 5,970,891 - AO353_27300 0.65 -3.0 5,970,891 - AO353_27300 0.65 -1.6 5,970,891 - AO353_27300 0.65 -0.4 5,970,891 - AO353_27300 0.65 -2.7 5,970,891 - AO353_27300 0.65 -1.4 5,970,891 - AO353_27300 0.65 -1.6 5,970,891 - AO353_27300 0.65 +0.6 5,970,891 - AO353_27300 0.65 -3.1 5,970,891 - AO353_27300 0.65 -2.5 5,970,893 + AO353_27300 0.65 +0.2 5,970,893 + AO353_27300 0.65 +0.4 5,970,893 + AO353_27300 0.65 +0.7 5,970,893 + AO353_27300 0.65 +0.1 5,970,893 + AO353_27300 0.65 +1.1 5,970,894 - AO353_27300 0.65 -1.6 5,970,894 - AO353_27300 0.65 -2.3 5,970,894 - AO353_27300 0.65 -1.4 5,970,894 - AO353_27300 0.65 -2.3 5,970,894 - AO353_27300 0.65 -0.4 5,970,894 - AO353_27300 0.65 -2.0 5,970,894 - AO353_27300 0.65 +0.1 5,971,010 + AO353_27300 0.84 -1.1 5,971,010 + AO353_27300 0.84 -0.8 5,971,010 + AO353_27300 0.84 -0.0 5,971,010 + AO353_27300 0.84 -0.4 5,971,011 - AO353_27300 0.84 -1.3 5,971,093 + +1.2 5,971,094 - -0.0 5,971,094 - -1.4 5,971,128 + +1.0 5,971,129 - -1.2 5,971,412 + AO353_27305 0.35 -0.1 5,971,413 - AO353_27305 0.35 -0.4 5,971,502 - AO353_27305 0.45 -2.5 5,971,502 - AO353_27305 0.45 -1.4 5,971,506 + AO353_27305 0.45 -0.3 5,971,506 + AO353_27305 0.45 -0.1 5,971,506 + AO353_27305 0.45 -0.1 5,971,506 + AO353_27305 0.45 -0.6 5,971,506 + AO353_27305 0.45 +0.3 5,971,507 - AO353_27305 0.45 -1.1 5,971,507 - AO353_27305 0.45 +0.6 5,971,507 - AO353_27305 0.45 +0.4 5,971,575 + AO353_27305 0.53 -0.5 5,971,575 + AO353_27305 0.53 -0.1 5,971,575 + AO353_27305 0.53 -0.4 5,971,575 + AO353_27305 0.53 +0.5 5,971,575 + AO353_27305 0.53 -2.6 5,971,575 + AO353_27305 0.53 -0.4 5,971,575 + AO353_27305 0.53 +1.1 5,971,575 + AO353_27305 0.53 +0.8 5,971,575 + AO353_27305 0.53 +1.9 5,971,576 - AO353_27305 0.53 -0.1 5,971,576 - AO353_27305 0.53 -0.4 5,971,576 - AO353_27305 0.53 +1.2 5,971,576 - AO353_27305 0.53 -1.9 5,971,576 - AO353_27305 0.53 -0.6 5,971,611 + AO353_27305 0.57 -0.6 5,971,612 - AO353_27305 0.57 +1.4 5,971,612 - AO353_27305 0.57 -1.4 5,971,751 + AO353_27305 0.73 +1.4 5,971,752 - AO353_27305 0.73 -1.1 5,971,752 - AO353_27305 0.73 -0.6 5,971,818 + AO353_27305 0.81 -0.6 5,971,818 + AO353_27305 0.81 -0.6 5,971,818 + AO353_27305 0.81 -1.9 5,971,818 + AO353_27305 0.81 -1.3 5,971,818 + AO353_27305 0.81 -0.3 5,971,818 + AO353_27305 0.81 -1.3 5,971,819 - AO353_27305 0.81 -1.3 5,971,819 - AO353_27305 0.81 +2.8 5,971,819 - +0.9 5,971,819 - AO353_27305 0.81 +0.6 5,971,819 - AO353_27305 0.81 -1.1 5,971,819 - AO353_27305 0.81 -1.3 5,971,819 - AO353_27305 0.81 +0.4 5,971,887 + AO353_27305 0.89 -2.3 5,971,887 + AO353_27305 0.89 -1.4 5,971,887 + AO353_27305 0.89 -1.6 5,971,888 - AO353_27305 0.89 +0.0 5,971,917 + +0.7 5,971,917 + -1.9 5,971,917 + -0.3 5,971,917 + +0.1 5,971,917 + -0.0 5,971,918 - +1.3 5,971,918 - -0.7 5,971,981 + +0.3 5,971,981 + -2.0 5,971,987 + -0.9 5,971,987 + -0.9 5,971,987 + -0.4 5,971,988 - -0.5 5,971,988 - -1.9 5,971,994 - -0.0
Or see this region's nucleotide sequence