Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27125 and AO353_27130 are separated by 483 nucleotides AO353_27130 and AO353_27135 are separated by 206 nucleotides AO353_27135 and AO353_27140 are separated by 215 nucleotides AO353_27140 and AO353_27145 are separated by 62 nucleotides
AO353_27125: AO353_27125 - hypothetical protein, at 5,942,511 to 5,942,714
_27125
AO353_27130: AO353_27130 - hypothetical protein, at 5,943,198 to 5,943,386
_27130
AO353_27135: AO353_27135 - hypothetical protein, at 5,943,593 to 5,943,814
_27135
AO353_27140: AO353_27140 - hypothetical protein, at 5,944,030 to 5,944,242
_27140
AO353_27145: AO353_27145 - hypothetical protein, at 5,944,305 to 5,944,922
_27145
Position (kb)
5943
5944 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5942.219 kb on + strand at 5942.220 kb on - strand at 5942.233 kb on + strand at 5942.233 kb on + strand at 5942.234 kb on - strand at 5942.274 kb on + strand at 5942.274 kb on + strand at 5942.274 kb on + strand at 5942.275 kb on - strand at 5942.275 kb on - strand at 5942.283 kb on + strand at 5942.284 kb on - strand at 5942.284 kb on - strand at 5942.284 kb on - strand at 5942.284 kb on - strand at 5942.284 kb on - strand at 5942.284 kb on - strand at 5942.329 kb on - strand at 5942.429 kb on + strand at 5942.430 kb on - strand at 5942.430 kb on - strand at 5942.430 kb on - strand at 5942.430 kb on - strand at 5942.431 kb on + strand at 5942.431 kb on + strand at 5942.431 kb on + strand at 5942.431 kb on + strand at 5942.431 kb on + strand at 5942.432 kb on - strand at 5942.432 kb on - strand at 5942.432 kb on - strand at 5942.432 kb on - strand at 5942.432 kb on - strand at 5942.432 kb on - strand at 5942.610 kb on + strand, within AO353_27125 at 5942.611 kb on - strand, within AO353_27125 at 5942.611 kb on - strand, within AO353_27125 at 5942.611 kb on - strand, within AO353_27125 at 5942.612 kb on + strand, within AO353_27125 at 5942.612 kb on + strand, within AO353_27125 at 5942.613 kb on - strand, within AO353_27125 at 5942.636 kb on + strand, within AO353_27125 at 5942.636 kb on + strand, within AO353_27125 at 5942.637 kb on - strand, within AO353_27125 at 5942.637 kb on - strand, within AO353_27125 at 5942.651 kb on + strand, within AO353_27125 at 5942.651 kb on + strand, within AO353_27125 at 5942.651 kb on + strand, within AO353_27125 at 5942.652 kb on - strand, within AO353_27125 at 5942.662 kb on + strand, within AO353_27125 at 5942.662 kb on + strand, within AO353_27125 at 5942.662 kb on + strand, within AO353_27125 at 5942.662 kb on + strand, within AO353_27125 at 5942.663 kb on - strand, within AO353_27125 at 5942.663 kb on - strand, within AO353_27125 at 5942.663 kb on - strand, within AO353_27125 at 5942.737 kb on + strand at 5942.737 kb on + strand at 5942.737 kb on + strand at 5942.737 kb on + strand at 5942.738 kb on - strand at 5942.738 kb on - strand at 5942.738 kb on - strand at 5942.738 kb on - strand at 5942.738 kb on - strand at 5942.744 kb on + strand at 5942.744 kb on + strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.745 kb on - strand at 5942.786 kb on + strand at 5942.786 kb on + strand at 5942.786 kb on + strand at 5942.786 kb on + strand at 5942.787 kb on - strand at 5942.787 kb on - strand at 5942.787 kb on - strand at 5942.919 kb on + strand at 5943.025 kb on + strand at 5943.025 kb on + strand at 5943.026 kb on - strand at 5943.026 kb on - strand at 5943.026 kb on - strand at 5943.026 kb on - strand at 5943.026 kb on - strand at 5943.032 kb on + strand at 5943.040 kb on + strand at 5943.064 kb on - strand at 5943.064 kb on - strand at 5943.064 kb on - strand at 5943.064 kb on - strand at 5943.087 kb on + strand at 5943.087 kb on + strand at 5943.088 kb on - strand at 5943.088 kb on - strand at 5943.088 kb on - strand at 5943.131 kb on + strand at 5943.132 kb on - strand at 5943.132 kb on - strand at 5943.132 kb on - strand at 5943.144 kb on + strand at 5943.144 kb on + strand at 5943.144 kb on + strand at 5943.144 kb on + strand at 5943.145 kb on - strand at 5943.145 kb on - strand at 5943.145 kb on - strand at 5943.145 kb on - strand at 5943.145 kb on - strand at 5943.145 kb on - strand at 5943.148 kb on + strand at 5943.148 kb on + strand at 5943.148 kb on + strand at 5943.148 kb on + strand at 5943.148 kb on + strand at 5943.149 kb on - strand at 5943.149 kb on - strand at 5943.149 kb on - strand at 5943.195 kb on + strand at 5943.195 kb on + strand at 5943.196 kb on - strand at 5943.196 kb on - strand at 5943.196 kb on - strand at 5943.204 kb on + strand at 5943.205 kb on - strand at 5943.205 kb on - strand at 5943.206 kb on + strand at 5943.206 kb on + strand at 5943.206 kb on + strand at 5943.206 kb on + strand at 5943.206 kb on + strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.207 kb on - strand at 5943.328 kb on + strand, within AO353_27130 at 5943.328 kb on + strand, within AO353_27130 at 5943.328 kb on + strand, within AO353_27130 at 5943.329 kb on - strand, within AO353_27130 at 5943.337 kb on + strand, within AO353_27130 at 5943.407 kb on + strand at 5943.408 kb on - strand at 5943.408 kb on - strand at 5943.447 kb on + strand at 5943.447 kb on + strand at 5943.448 kb on - strand at 5943.448 kb on - strand at 5943.497 kb on + strand at 5943.498 kb on - strand at 5943.498 kb on - strand at 5943.524 kb on - strand at 5943.549 kb on + strand at 5943.549 kb on + strand at 5943.549 kb on + strand at 5943.554 kb on + strand at 5943.572 kb on + strand at 5943.572 kb on + strand at 5943.573 kb on - strand at 5943.573 kb on - strand at 5943.573 kb on - strand at 5943.573 kb on - strand at 5943.573 kb on - strand at 5943.573 kb on - strand at 5943.588 kb on + strand at 5943.641 kb on - strand, within AO353_27135 at 5943.641 kb on - strand, within AO353_27135 at 5943.641 kb on - strand, within AO353_27135 at 5943.644 kb on + strand, within AO353_27135 at 5943.644 kb on + strand, within AO353_27135 at 5943.687 kb on + strand, within AO353_27135 at 5943.688 kb on - strand, within AO353_27135 at 5943.688 kb on - strand, within AO353_27135 at 5943.688 kb on - strand, within AO353_27135 at 5943.727 kb on - strand, within AO353_27135 at 5943.739 kb on + strand, within AO353_27135 at 5943.763 kb on + strand, within AO353_27135 at 5943.764 kb on - strand, within AO353_27135 at 5943.799 kb on - strand at 5943.799 kb on - strand at 5943.801 kb on - strand at 5943.807 kb on - strand at 5943.828 kb on + strand at 5943.831 kb on + strand at 5943.831 kb on + strand at 5943.886 kb on + strand at 5943.886 kb on + strand at 5943.934 kb on - strand at 5943.934 kb on - strand at 5943.948 kb on - strand at 5943.969 kb on + strand at 5943.969 kb on + strand at 5943.970 kb on - strand at 5944.019 kb on - strand at 5944.304 kb on + strand at 5944.304 kb on + strand at 5944.314 kb on - strand at 5944.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.008 vol% remove 5,942,219 + +0.4 5,942,220 - +0.4 5,942,233 + +0.1 5,942,233 + +1.1 5,942,234 - -0.3 5,942,274 + -1.7 5,942,274 + -0.6 5,942,274 + +1.1 5,942,275 - +0.4 5,942,275 - -0.3 5,942,283 + +1.0 5,942,284 - -1.1 5,942,284 - -0.6 5,942,284 - -0.0 5,942,284 - -0.1 5,942,284 - +1.6 5,942,284 - +1.1 5,942,329 - +1.0 5,942,429 + +1.4 5,942,430 - -0.6 5,942,430 - +0.7 5,942,430 - -0.7 5,942,430 - -1.3 5,942,431 + +0.9 5,942,431 + +1.4 5,942,431 + +0.4 5,942,431 + +1.2 5,942,431 + -1.6 5,942,432 - -0.2 5,942,432 - -1.0 5,942,432 - -0.6 5,942,432 - -0.1 5,942,432 - +0.6 5,942,432 - +0.3 5,942,610 + AO353_27125 0.49 -2.5 5,942,611 - AO353_27125 0.49 -0.9 5,942,611 - AO353_27125 0.49 +0.9 5,942,611 - AO353_27125 0.49 -0.6 5,942,612 + AO353_27125 0.50 -2.5 5,942,612 + AO353_27125 0.50 +1.0 5,942,613 - AO353_27125 0.50 -2.1 5,942,636 + AO353_27125 0.61 +2.4 5,942,636 + AO353_27125 0.61 +1.3 5,942,637 - AO353_27125 0.62 -1.0 5,942,637 - AO353_27125 0.62 +0.2 5,942,651 + AO353_27125 0.69 -1.4 5,942,651 + AO353_27125 0.69 -0.9 5,942,651 + AO353_27125 0.69 -1.4 5,942,652 - AO353_27125 0.69 +0.2 5,942,662 + AO353_27125 0.74 -1.7 5,942,662 + AO353_27125 0.74 +0.4 5,942,662 + AO353_27125 0.74 +0.1 5,942,662 + AO353_27125 0.74 -0.1 5,942,663 - AO353_27125 0.75 -0.1 5,942,663 - AO353_27125 0.75 -0.1 5,942,663 - AO353_27125 0.75 -1.2 5,942,737 + -1.0 5,942,737 + -1.4 5,942,737 + +1.0 5,942,737 + -1.0 5,942,738 - +0.7 5,942,738 - +0.6 5,942,738 - -0.6 5,942,738 - +1.0 5,942,738 - -1.6 5,942,744 + -0.1 5,942,744 + +0.7 5,942,745 - -0.1 5,942,745 - +0.4 5,942,745 - +1.1 5,942,745 - -0.9 5,942,745 - +0.0 5,942,745 - +1.1 5,942,745 - +0.1 5,942,745 - -0.4 5,942,786 + -1.1 5,942,786 + +0.5 5,942,786 + -0.3 5,942,786 + -2.6 5,942,787 - -0.3 5,942,787 - +0.4 5,942,787 - +2.0 5,942,919 + +0.4 5,943,025 + -0.1 5,943,025 + +3.0 5,943,026 - -0.4 5,943,026 - +1.0 5,943,026 - +0.2 5,943,026 - +1.4 5,943,026 - -0.1 5,943,032 + +0.4 5,943,040 + -0.1 5,943,064 - -0.3 5,943,064 - -0.9 5,943,064 - +1.4 5,943,064 - +0.0 5,943,087 + +0.6 5,943,087 + +0.7 5,943,088 - +0.9 5,943,088 - +0.4 5,943,088 - -0.4 5,943,131 + -1.1 5,943,132 - +0.3 5,943,132 - -0.6 5,943,132 - -0.0 5,943,144 + +0.4 5,943,144 + +0.0 5,943,144 + -0.8 5,943,144 + -0.6 5,943,145 - -0.1 5,943,145 - -1.1 5,943,145 - +0.1 5,943,145 - -0.4 5,943,145 - +1.4 5,943,145 - -2.1 5,943,148 + +0.1 5,943,148 + +1.2 5,943,148 + -2.0 5,943,148 + -0.4 5,943,148 + -1.1 5,943,149 - +1.0 5,943,149 - -0.4 5,943,149 - -0.2 5,943,195 + +1.4 5,943,195 + -0.1 5,943,196 - -0.8 5,943,196 - -0.5 5,943,196 - -0.6 5,943,204 + -1.3 5,943,205 - +0.4 5,943,205 - +0.3 5,943,206 + +0.4 5,943,206 + +0.6 5,943,206 + +1.4 5,943,206 + -0.3 5,943,206 + +1.3 5,943,207 - -0.3 5,943,207 - +1.1 5,943,207 - +1.9 5,943,207 - -0.4 5,943,207 - -0.9 5,943,207 - -0.1 5,943,207 - -1.0 5,943,207 - +0.2 5,943,207 - -2.0 5,943,207 - +2.4 5,943,207 - +0.2 5,943,328 + AO353_27130 0.69 -1.4 5,943,328 + AO353_27130 0.69 -0.3 5,943,328 + AO353_27130 0.69 -2.0 5,943,329 - AO353_27130 0.69 -1.1 5,943,337 + AO353_27130 0.74 -0.1 5,943,407 + -0.6 5,943,408 - -0.4 5,943,408 - +0.1 5,943,447 + -0.6 5,943,447 + +1.1 5,943,448 - +0.4 5,943,448 - +1.0 5,943,497 + -1.9 5,943,498 - -1.1 5,943,498 - -2.1 5,943,524 - +0.6 5,943,549 + -0.3 5,943,549 + +0.0 5,943,549 + +0.6 5,943,554 + -0.9 5,943,572 + -0.1 5,943,572 + -1.1 5,943,573 - -0.7 5,943,573 - -0.1 5,943,573 - +1.4 5,943,573 - -0.2 5,943,573 - -0.7 5,943,573 - +0.6 5,943,588 + -0.3 5,943,641 - AO353_27135 0.22 +0.3 5,943,641 - AO353_27135 0.22 -0.6 5,943,641 - AO353_27135 0.22 +0.8 5,943,644 + AO353_27135 0.23 +1.1 5,943,644 + AO353_27135 0.23 -0.6 5,943,687 + AO353_27135 0.42 -0.7 5,943,688 - AO353_27135 0.43 -0.3 5,943,688 - AO353_27135 0.43 +0.7 5,943,688 - AO353_27135 0.43 -1.0 5,943,727 - AO353_27135 0.60 +0.0 5,943,739 + AO353_27135 0.66 +0.7 5,943,763 + AO353_27135 0.77 -0.2 5,943,764 - AO353_27135 0.77 -0.1 5,943,799 - +0.2 5,943,799 - +0.4 5,943,801 - -1.1 5,943,807 - -0.1 5,943,828 + -0.6 5,943,831 + +0.4 5,943,831 + -1.1 5,943,886 + -0.9 5,943,886 + +1.9 5,943,934 - +3.0 5,943,934 - +1.2 5,943,948 - +0.1 5,943,969 + -1.5 5,943,969 + -0.2 5,943,970 - +1.6 5,944,019 - -2.5 5,944,304 + +0.1 5,944,304 + -1.4 5,944,314 - +1.0 5,944,359 - -0.1
Or see this region's nucleotide sequence