Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12050 and AO353_12055 overlap by 4 nucleotides AO353_12055 and AO353_12060 are separated by 82 nucleotides AO353_12060 and AO353_12065 are separated by 272 nucleotides
AO353_12050: AO353_12050 - A/G-specific adenine glycosylase, at 2,648,398 to 2,649,465
_12050
AO353_12055: AO353_12055 - cell envelope biogenesis protein AsmA, at 2,649,462 to 2,651,693
_12055
AO353_12060: AO353_12060 - acetyltransferase, at 2,651,776 to 2,652,174
_12060
AO353_12065: AO353_12065 - MFS transporter, at 2,652,447 to 2,654,108
_12065
Position (kb)
2649
2650
2651
2652 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2648.493 kb on + strand at 2648.493 kb on + strand at 2648.493 kb on + strand at 2648.493 kb on + strand at 2648.493 kb on + strand at 2648.494 kb on - strand at 2648.495 kb on + strand at 2648.495 kb on + strand at 2648.496 kb on - strand at 2648.496 kb on - strand at 2648.496 kb on - strand at 2648.496 kb on - strand at 2648.496 kb on - strand at 2648.496 kb on - strand at 2648.724 kb on - strand, within AO353_12050 at 2648.790 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.863 kb on + strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.864 kb on - strand, within AO353_12050 at 2648.927 kb on + strand, within AO353_12050 at 2648.928 kb on - strand, within AO353_12050 at 2648.928 kb on - strand, within AO353_12050 at 2648.928 kb on - strand, within AO353_12050 at 2648.928 kb on - strand, within AO353_12050 at 2648.945 kb on + strand, within AO353_12050 at 2648.946 kb on - strand, within AO353_12050 at 2648.946 kb on - strand, within AO353_12050 at 2649.022 kb on - strand, within AO353_12050 at 2649.022 kb on - strand, within AO353_12050 at 2649.022 kb on - strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.218 kb on + strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.219 kb on - strand, within AO353_12050 at 2649.221 kb on + strand, within AO353_12050 at 2649.221 kb on + strand, within AO353_12050 at 2649.222 kb on - strand, within AO353_12050 at 2649.222 kb on - strand, within AO353_12050 at 2649.314 kb on + strand, within AO353_12050 at 2649.314 kb on + strand, within AO353_12050 at 2649.314 kb on + strand, within AO353_12050 at 2649.314 kb on + strand, within AO353_12050 at 2649.314 kb on + strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.315 kb on - strand, within AO353_12050 at 2649.425 kb on + strand at 2649.425 kb on + strand at 2649.425 kb on + strand at 2650.198 kb on + strand, within AO353_12055 at 2650.198 kb on + strand, within AO353_12055 at 2650.198 kb on + strand, within AO353_12055 at 2650.198 kb on + strand, within AO353_12055 at 2650.198 kb on + strand, within AO353_12055 at 2650.199 kb on - strand, within AO353_12055 at 2650.894 kb on + strand, within AO353_12055 at 2650.894 kb on + strand, within AO353_12055 at 2650.895 kb on - strand, within AO353_12055 at 2650.895 kb on - strand, within AO353_12055 at 2650.895 kb on - strand, within AO353_12055 at 2651.019 kb on + strand, within AO353_12055 at 2651.019 kb on + strand, within AO353_12055 at 2651.020 kb on - strand, within AO353_12055 at 2651.020 kb on - strand, within AO353_12055 at 2651.146 kb on + strand, within AO353_12055 at 2651.146 kb on + strand, within AO353_12055 at 2651.146 kb on + strand, within AO353_12055 at 2651.146 kb on + strand, within AO353_12055 at 2651.146 kb on + strand, within AO353_12055 at 2651.147 kb on - strand, within AO353_12055 at 2651.147 kb on - strand, within AO353_12055 at 2651.147 kb on - strand, within AO353_12055 at 2651.147 kb on - strand, within AO353_12055 at 2651.147 kb on - strand, within AO353_12055 at 2651.227 kb on - strand, within AO353_12055 at 2651.315 kb on + strand, within AO353_12055 at 2651.590 kb on + strand at 2651.590 kb on + strand at 2651.591 kb on - strand at 2651.591 kb on - strand at 2651.591 kb on - strand at 2651.591 kb on - strand at 2651.591 kb on - strand at 2651.661 kb on + strand at 2651.661 kb on + strand at 2651.661 kb on + strand at 2651.661 kb on + strand at 2651.661 kb on + strand at 2651.662 kb on - strand at 2651.662 kb on - strand at 2651.662 kb on - strand at 2651.707 kb on + strand at 2651.707 kb on + strand at 2651.707 kb on + strand at 2651.707 kb on + strand at 2651.708 kb on - strand at 2651.708 kb on - strand at 2651.708 kb on - strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.738 kb on + strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.739 kb on - strand at 2651.740 kb on + strand at 2651.741 kb on - strand at 2651.777 kb on + strand at 2651.777 kb on + strand at 2651.777 kb on + strand at 2651.778 kb on - strand at 2651.954 kb on - strand, within AO353_12060 at 2651.954 kb on - strand, within AO353_12060 at 2652.107 kb on + strand, within AO353_12060 at 2652.107 kb on + strand, within AO353_12060 at 2652.107 kb on + strand, within AO353_12060 at 2652.107 kb on + strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.108 kb on - strand, within AO353_12060 at 2652.138 kb on - strand at 2652.138 kb on - strand at 2652.138 kb on - strand at 2652.174 kb on + strand at 2652.174 kb on + strand at 2652.174 kb on + strand at 2652.174 kb on + strand at 2652.175 kb on - strand at 2652.206 kb on + strand at 2652.207 kb on - strand at 2652.233 kb on + strand at 2652.234 kb on - strand at 2652.303 kb on + strand at 2652.359 kb on + strand at 2652.360 kb on - strand at 2652.360 kb on - strand at 2652.360 kb on - strand at 2652.423 kb on + strand at 2652.423 kb on + strand at 2652.423 kb on + strand at 2652.423 kb on + strand at 2652.423 kb on + strand at 2652.423 kb on + strand at 2652.424 kb on - strand at 2652.424 kb on - strand at 2652.424 kb on - strand at 2652.424 kb on - strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.426 kb on + strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.427 kb on - strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.429 kb on + strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.430 kb on - strand at 2652.473 kb on + strand at 2652.473 kb on + strand at 2652.474 kb on - strand at 2652.474 kb on - strand at 2652.588 kb on + strand at 2652.589 kb on - strand at 2652.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.008 vol% remove 2,648,493 + +1.1 2,648,493 + +0.2 2,648,493 + -0.9 2,648,493 + +0.7 2,648,493 + +0.7 2,648,494 - -0.2 2,648,495 + +1.5 2,648,495 + +2.7 2,648,496 - -0.4 2,648,496 - -0.5 2,648,496 - +1.1 2,648,496 - -1.6 2,648,496 - +0.6 2,648,496 - -0.0 2,648,724 - AO353_12050 0.31 -1.5 2,648,790 + AO353_12050 0.37 -0.4 2,648,863 + AO353_12050 0.44 +0.1 2,648,863 + AO353_12050 0.44 +0.6 2,648,863 + AO353_12050 0.44 +0.3 2,648,863 + AO353_12050 0.44 -2.5 2,648,863 + AO353_12050 0.44 -0.5 2,648,863 + AO353_12050 0.44 -1.4 2,648,863 + AO353_12050 0.44 -2.4 2,648,863 + AO353_12050 0.44 -0.5 2,648,863 + AO353_12050 0.44 -1.2 2,648,863 + AO353_12050 0.44 +0.8 2,648,863 + AO353_12050 0.44 -0.7 2,648,863 + AO353_12050 0.44 +0.1 2,648,863 + AO353_12050 0.44 -0.9 2,648,863 + AO353_12050 0.44 +0.1 2,648,863 + AO353_12050 0.44 +0.5 2,648,863 + AO353_12050 0.44 +1.8 2,648,863 + AO353_12050 0.44 -1.2 2,648,864 - AO353_12050 0.44 -1.1 2,648,864 - AO353_12050 0.44 +1.5 2,648,864 - AO353_12050 0.44 -0.0 2,648,864 - AO353_12050 0.44 +0.2 2,648,864 - AO353_12050 0.44 +0.9 2,648,864 - AO353_12050 0.44 +0.7 2,648,864 - AO353_12050 0.44 +1.2 2,648,864 - AO353_12050 0.44 +1.1 2,648,864 - AO353_12050 0.44 -1.2 2,648,864 - AO353_12050 0.44 +0.0 2,648,864 - AO353_12050 0.44 +0.6 2,648,864 - AO353_12050 0.44 -1.1 2,648,864 - AO353_12050 0.44 -1.2 2,648,864 - AO353_12050 0.44 +0.1 2,648,864 - AO353_12050 0.44 +0.0 2,648,927 + AO353_12050 0.50 -1.0 2,648,928 - AO353_12050 0.50 +0.9 2,648,928 - AO353_12050 0.50 -1.1 2,648,928 - AO353_12050 0.50 +1.9 2,648,928 - AO353_12050 0.50 -0.3 2,648,945 + AO353_12050 0.51 +0.8 2,648,946 - AO353_12050 0.51 -0.5 2,648,946 - AO353_12050 0.51 +2.1 2,649,022 - AO353_12050 0.58 -0.0 2,649,022 - AO353_12050 0.58 -0.7 2,649,022 - AO353_12050 0.58 +0.5 2,649,218 + AO353_12050 0.77 -0.8 2,649,218 + AO353_12050 0.77 +0.9 2,649,218 + AO353_12050 0.77 -0.7 2,649,218 + AO353_12050 0.77 -0.4 2,649,218 + AO353_12050 0.77 -1.1 2,649,218 + AO353_12050 0.77 +0.2 2,649,218 + AO353_12050 0.77 +1.3 2,649,218 + AO353_12050 0.77 +0.7 2,649,218 + AO353_12050 0.77 -2.5 2,649,218 + AO353_12050 0.77 -3.2 2,649,218 + AO353_12050 0.77 +1.9 2,649,218 + AO353_12050 0.77 -1.7 2,649,218 + AO353_12050 0.77 -0.7 2,649,218 + AO353_12050 0.77 +0.1 2,649,218 + AO353_12050 0.77 -1.8 2,649,219 - AO353_12050 0.77 +0.9 2,649,219 - AO353_12050 0.77 -0.9 2,649,219 - AO353_12050 0.77 +0.5 2,649,219 - AO353_12050 0.77 -0.3 2,649,219 - AO353_12050 0.77 +0.6 2,649,219 - AO353_12050 0.77 -0.2 2,649,219 - AO353_12050 0.77 -0.4 2,649,219 - AO353_12050 0.77 -0.2 2,649,219 - AO353_12050 0.77 +1.7 2,649,219 - AO353_12050 0.77 +0.4 2,649,219 - AO353_12050 0.77 +0.1 2,649,219 - AO353_12050 0.77 +2.1 2,649,221 + AO353_12050 0.77 -0.0 2,649,221 + AO353_12050 0.77 -0.9 2,649,222 - AO353_12050 0.77 -1.0 2,649,222 - AO353_12050 0.77 +1.1 2,649,314 + AO353_12050 0.86 -0.2 2,649,314 + AO353_12050 0.86 -0.2 2,649,314 + AO353_12050 0.86 -0.5 2,649,314 + AO353_12050 0.86 +1.0 2,649,314 + AO353_12050 0.86 -0.6 2,649,315 - AO353_12050 0.86 -0.6 2,649,315 - AO353_12050 0.86 +0.3 2,649,315 - AO353_12050 0.86 +0.0 2,649,315 - AO353_12050 0.86 -1.0 2,649,315 - AO353_12050 0.86 +1.3 2,649,315 - AO353_12050 0.86 +0.6 2,649,425 + +2.3 2,649,425 + -1.1 2,649,425 + +0.8 2,650,198 + AO353_12055 0.33 -2.4 2,650,198 + AO353_12055 0.33 -0.5 2,650,198 + AO353_12055 0.33 +0.5 2,650,198 + AO353_12055 0.33 +0.1 2,650,198 + AO353_12055 0.33 -0.0 2,650,199 - AO353_12055 0.33 -0.0 2,650,894 + AO353_12055 0.64 -2.0 2,650,894 + AO353_12055 0.64 +1.1 2,650,895 - AO353_12055 0.64 -0.5 2,650,895 - AO353_12055 0.64 -0.6 2,650,895 - AO353_12055 0.64 +1.1 2,651,019 + AO353_12055 0.70 -3.0 2,651,019 + AO353_12055 0.70 -0.4 2,651,020 - AO353_12055 0.70 -1.8 2,651,020 - AO353_12055 0.70 -0.4 2,651,146 + AO353_12055 0.75 -2.1 2,651,146 + AO353_12055 0.75 -0.9 2,651,146 + AO353_12055 0.75 -0.5 2,651,146 + AO353_12055 0.75 -1.4 2,651,146 + AO353_12055 0.75 -1.9 2,651,147 - AO353_12055 0.75 +0.2 2,651,147 - AO353_12055 0.75 -1.3 2,651,147 - AO353_12055 0.75 -0.2 2,651,147 - AO353_12055 0.75 +1.2 2,651,147 - AO353_12055 0.75 -1.1 2,651,227 - AO353_12055 0.79 -1.1 2,651,315 + AO353_12055 0.83 +0.9 2,651,590 + +0.2 2,651,590 + -0.6 2,651,591 - -1.7 2,651,591 - +1.2 2,651,591 - -2.1 2,651,591 - +0.3 2,651,591 - -0.1 2,651,661 + +0.6 2,651,661 + +1.0 2,651,661 + +0.9 2,651,661 + -0.3 2,651,661 + +1.1 2,651,662 - +0.7 2,651,662 - -1.9 2,651,662 - +0.9 2,651,707 + -0.9 2,651,707 + -0.6 2,651,707 + -0.6 2,651,707 + +0.4 2,651,708 - -0.5 2,651,708 - +0.2 2,651,708 - +0.9 2,651,738 + +1.3 2,651,738 + -1.8 2,651,738 + +1.5 2,651,738 + +0.1 2,651,738 + -0.5 2,651,738 + -0.6 2,651,738 + -0.5 2,651,739 - +0.1 2,651,739 - +1.2 2,651,739 - -0.7 2,651,739 - +0.1 2,651,739 - -0.2 2,651,739 - +1.3 2,651,739 - +0.8 2,651,739 - -0.1 2,651,740 + +0.2 2,651,741 - +0.5 2,651,777 + -0.5 2,651,777 + -0.5 2,651,777 + +1.7 2,651,778 - +0.3 2,651,954 - AO353_12060 0.45 -0.1 2,651,954 - AO353_12060 0.45 +0.8 2,652,107 + AO353_12060 0.83 -0.6 2,652,107 + AO353_12060 0.83 +0.5 2,652,107 + AO353_12060 0.83 -0.2 2,652,107 + AO353_12060 0.83 +0.0 2,652,108 - AO353_12060 0.83 +2.3 2,652,108 - AO353_12060 0.83 -0.5 2,652,108 - AO353_12060 0.83 +1.0 2,652,108 - AO353_12060 0.83 +0.0 2,652,108 - AO353_12060 0.83 -1.4 2,652,108 - AO353_12060 0.83 +1.4 2,652,108 - AO353_12060 0.83 +0.0 2,652,108 - AO353_12060 0.83 -0.0 2,652,138 - -0.4 2,652,138 - +0.9 2,652,138 - +0.2 2,652,174 + -0.2 2,652,174 + -1.1 2,652,174 + -1.8 2,652,174 + -1.4 2,652,175 - +0.3 2,652,206 + -0.0 2,652,207 - +0.3 2,652,233 + -1.8 2,652,234 - +1.5 2,652,303 + -1.1 2,652,359 + -0.3 2,652,360 - +0.4 2,652,360 - -0.2 2,652,360 - -0.4 2,652,423 + +3.1 2,652,423 + -1.8 2,652,423 + -0.4 2,652,423 + +0.2 2,652,423 + +0.2 2,652,423 + -0.4 2,652,424 - +0.1 2,652,424 - +1.1 2,652,424 - +0.8 2,652,424 - +0.3 2,652,426 + +0.5 2,652,426 + -2.6 2,652,426 + +1.8 2,652,426 + -0.4 2,652,426 + +0.2 2,652,426 + +1.1 2,652,426 + +1.4 2,652,427 - +0.5 2,652,427 - +0.3 2,652,427 - +2.1 2,652,427 - +1.0 2,652,427 - +0.5 2,652,427 - -0.7 2,652,427 - -0.5 2,652,427 - +0.2 2,652,427 - -0.0 2,652,427 - -0.3 2,652,429 + +0.9 2,652,429 + -0.7 2,652,429 + -0.6 2,652,429 + -0.2 2,652,429 + -1.5 2,652,429 + -1.4 2,652,429 + +2.1 2,652,429 + -0.1 2,652,429 + -0.5 2,652,429 + +1.1 2,652,430 - -1.2 2,652,430 - -0.3 2,652,430 - -0.6 2,652,430 - -1.6 2,652,430 - +0.5 2,652,430 - -0.2 2,652,430 - +0.1 2,652,430 - +0.6 2,652,430 - +0.2 2,652,430 - +0.3 2,652,430 - +0.8 2,652,430 - +0.8 2,652,430 - +1.4 2,652,473 + +0.9 2,652,473 + -0.4 2,652,474 - -0.1 2,652,474 - -0.9 2,652,588 + -0.2 2,652,589 - -1.1 2,652,589 - -3.3
Or see this region's nucleotide sequence