Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03600 and AO353_03605 are separated by 108 nucleotides AO353_03605 and AO353_03610 are separated by 167 nucleotides AO353_03610 and AO353_03615 are separated by 666 nucleotides
AO353_03600: AO353_03600 - aspartate--tRNA(Asp/Asn) ligase, at 768,265 to 770,040
_03600
AO353_03605: AO353_03605 - FmdB family transcriptional regulator, at 770,149 to 770,370
_03605
AO353_03610: AO353_03610 - arylsulfate sulfotransferase, at 770,538 to 770,873
_03610
AO353_03615: AO353_03615 - cold-shock protein, at 771,540 to 772,142
_03615
Position (kb) 770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 770.062 kb on - strand at 770.108 kb on - strand at 770.108 kb on - strand at 770.151 kb on - strand at 770.151 kb on - strand at 770.211 kb on - strand, within AO353_03605 at 770.355 kb on - strand at 770.355 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.394 kb on - strand at 770.394 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.438 kb on - strand at 770.445 kb on - strand at 770.550 kb on - strand at 770.550 kb on - strand at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.885 kb on + strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.944 kb on + strand at 770.944 kb on + strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.960 kb on + strand at 770.960 kb on + strand at 770.961 kb on - strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.966 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.995 kb on - strand at 770.995 kb on - strand at 770.995 kb on - strand at 771.025 kb on + strand at 771.026 kb on - strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.046 kb on + strand at 771.047 kb on - strand at 771.049 kb on - strand at 771.049 kb on - strand at 771.093 kb on + strand at 771.094 kb on - strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.208 kb on - strand at 771.208 kb on - strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.288 kb on - strand at 771.288 kb on - strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.398 kb on - strand at 771.398 kb on - strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.453 kb on + strand at 771.522 kb on + strand at 771.599 kb on + strand at 771.600 kb on - strand at 771.600 kb on - strand at 771.625 kb on - strand, within AO353_03615 at 771.648 kb on + strand, within AO353_03615 at 771.649 kb on - strand, within AO353_03615
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.008 vol% remove 770,062 - +2.3 770,108 - -0.5 770,108 - +1.0 770,151 - +1.0 770,151 - -2.5 770,211 - AO353_03605 0.28 -0.2 770,355 - +1.3 770,355 - -0.9 770,361 - -0.3 770,361 - +0.5 770,361 - -0.6 770,361 - +0.7 770,361 - +0.9 770,361 - +1.9 770,361 - -0.1 770,361 - +0.3 770,361 - -0.2 770,361 - +0.4 770,361 - -2.8 770,394 - -0.2 770,394 - -1.2 770,436 - -1.5 770,436 - +1.7 770,436 - -0.7 770,436 - +0.7 770,436 - +0.1 770,436 - -1.5 770,436 - +0.1 770,436 - +0.1 770,438 - -0.2 770,445 - +1.4 770,550 - +0.7 770,550 - -2.8 770,574 + AO353_03610 0.11 -1.4 770,574 + AO353_03610 0.11 -0.3 770,574 + AO353_03610 0.11 -0.1 770,574 + AO353_03610 0.11 -1.9 770,575 - AO353_03610 0.11 +0.0 770,575 - AO353_03610 0.11 -0.5 770,642 + AO353_03610 0.31 -2.1 770,642 + AO353_03610 0.31 +1.5 770,642 + AO353_03610 0.31 +1.1 770,643 - AO353_03610 0.31 -2.5 770,643 - AO353_03610 0.31 -1.9 770,651 - AO353_03610 0.34 -1.9 770,651 - AO353_03610 0.34 -1.9 770,651 - AO353_03610 0.34 -0.6 770,651 - AO353_03610 0.34 -1.4 770,713 + AO353_03610 0.52 -0.4 770,713 + AO353_03610 0.52 -1.6 770,713 + AO353_03610 0.52 -0.6 770,714 - AO353_03610 0.52 -1.1 770,714 - AO353_03610 0.52 +0.3 770,714 - AO353_03610 0.52 -0.3 770,885 + +1.1 770,886 - +0.5 770,886 - +0.3 770,886 - +0.0 770,886 - -0.5 770,886 - -0.5 770,886 - +0.9 770,907 + +0.1 770,907 + -0.0 770,907 + +0.3 770,908 - -1.5 770,908 - +1.7 770,908 - -0.2 770,908 - -1.6 770,908 - +1.0 770,908 - +0.5 770,908 - +0.7 770,944 + +0.7 770,944 + -1.1 770,945 - -1.8 770,945 - -0.6 770,945 - -2.5 770,945 - -0.9 770,945 - -1.0 770,945 - -0.2 770,945 - -0.6 770,960 + -1.6 770,960 + -0.1 770,961 - +1.5 770,964 + -0.3 770,964 + -0.2 770,964 + +0.9 770,964 + +1.2 770,964 + +1.7 770,964 + +0.5 770,964 + +1.1 770,964 + -1.2 770,964 + +0.0 770,965 - +0.1 770,965 - -2.2 770,965 - -0.0 770,965 - -1.0 770,965 - -1.4 770,965 - -2.0 770,965 - +0.3 770,965 - +0.6 770,965 - +0.7 770,966 + -0.8 770,980 + +1.0 770,980 + -0.5 770,980 + +0.4 770,980 + +1.1 770,980 + +1.0 770,980 + -0.6 770,981 - -1.8 770,981 - +0.7 770,981 - -1.8 770,981 - -1.6 770,981 - -0.0 770,981 - +0.1 770,994 + -0.8 770,994 + -0.0 770,994 + -0.0 770,994 + +1.0 770,995 - -1.5 770,995 - -2.0 770,995 - +2.1 771,025 + +1.0 771,026 - +1.5 771,036 + -0.9 771,036 + +0.4 771,036 + -0.1 771,036 + +1.6 771,036 + +0.9 771,036 + +0.2 771,036 + +0.2 771,037 - -1.3 771,037 - -1.0 771,037 - +0.5 771,037 - -2.6 771,037 - -0.5 771,037 - +0.7 771,037 - -1.3 771,037 - +1.7 771,037 - +0.2 771,037 - +2.3 771,037 - -0.9 771,037 - +2.0 771,037 - -0.1 771,046 + +0.5 771,047 - -0.7 771,049 - -1.4 771,049 - -0.9 771,093 + -0.3 771,094 - -2.6 771,207 + -2.8 771,207 + -0.0 771,207 + -0.7 771,208 - -0.6 771,208 - -1.1 771,209 + +0.6 771,209 + -0.6 771,209 + +0.2 771,209 + +0.6 771,209 + -0.0 771,209 + +0.1 771,210 - -1.1 771,210 - +0.1 771,210 - -0.4 771,288 - -0.9 771,288 - +0.6 771,397 + -1.5 771,397 + +0.5 771,397 + +0.9 771,397 + +0.8 771,398 - -0.9 771,398 - -0.9 771,438 + +0.9 771,438 + -1.0 771,438 + -1.5 771,453 + +0.4 771,522 + -1.1 771,599 + +0.7 771,600 - -0.7 771,600 - +0.1 771,625 - AO353_03615 0.14 -1.6 771,648 + AO353_03615 0.18 +0.3 771,649 - AO353_03615 0.18 +0.7
Or see this region's nucleotide sequence