Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01850 and AO353_01855 overlap by 7 nucleotides AO353_01855 and AO353_01860 are separated by 480 nucleotides AO353_01860 and AO353_01865 are separated by 298 nucleotides
AO353_01850: AO353_01850 - succinate dehydrogenase, at 390,907 to 391,275
_01850
AO353_01855: AO353_01855 - succinate dehydrogenase, at 391,269 to 391,526
_01855
AO353_01860: AO353_01860 - type II citrate synthase, at 392,007 to 393,296
_01860
AO353_01865: AO353_01865 - cation/acetate symporter ActP, at 393,595 to 395,253
_01865
Position (kb) 392
393
394 Strain fitness (log2 ratio) -2
-1
0
1
2 at 391.781 kb on - strand at 391.783 kb on - strand at 391.824 kb on - strand at 391.826 kb on + strand at 391.827 kb on - strand at 391.827 kb on - strand at 391.914 kb on - strand at 391.935 kb on + strand at 391.943 kb on + strand at 391.943 kb on + strand at 391.943 kb on + strand at 391.945 kb on + strand at 391.945 kb on + strand at 391.992 kb on + strand at 391.992 kb on + strand at 391.996 kb on + strand at 391.996 kb on + strand at 391.996 kb on + strand at 393.294 kb on + strand at 393.294 kb on + strand at 393.295 kb on - strand at 393.295 kb on - strand at 393.319 kb on + strand at 393.319 kb on + strand at 393.319 kb on + strand at 393.320 kb on - strand at 393.320 kb on - strand at 393.350 kb on + strand at 393.413 kb on + strand at 393.413 kb on + strand at 393.413 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.507 kb on + strand at 393.508 kb on - strand at 393.508 kb on - strand at 393.508 kb on - strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.565 kb on + strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.566 kb on - strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.567 kb on + strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.568 kb on - strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.569 kb on + strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.570 kb on - strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.579 kb on + strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.580 kb on - strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.581 kb on + strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.582 kb on - strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.591 kb on + strand at 393.592 kb on - strand at 393.592 kb on - strand at 393.592 kb on - strand at 393.753 kb on - strand at 393.759 kb on - strand at 393.874 kb on - strand, within AO353_01865 at 393.874 kb on - strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.890 kb on + strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 393.891 kb on - strand, within AO353_01865 at 394.086 kb on - strand, within AO353_01865 at 394.086 kb on - strand, within AO353_01865 at 394.160 kb on - strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.185 kb on + strand, within AO353_01865 at 394.186 kb on - strand, within AO353_01865 at 394.186 kb on - strand, within AO353_01865
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.008 vol% remove 391,781 - +0.5 391,783 - +1.9 391,824 - -1.7 391,826 + -0.4 391,827 - -0.7 391,827 - +0.6 391,914 - +1.0 391,935 + +0.8 391,943 + +0.8 391,943 + +0.1 391,943 + -0.1 391,945 + -0.7 391,945 + +1.0 391,992 + +1.1 391,992 + -0.6 391,996 + +1.1 391,996 + -0.8 391,996 + +1.5 393,294 + -1.7 393,294 + -0.5 393,295 - +0.3 393,295 - +1.2 393,319 + +1.1 393,319 + +0.6 393,319 + +1.6 393,320 - -1.4 393,320 - +0.5 393,350 + +0.6 393,413 + -0.4 393,413 + +0.4 393,413 + +0.4 393,507 + +0.6 393,507 + +0.4 393,507 + +0.7 393,507 + +0.3 393,507 + +0.4 393,508 - +1.4 393,508 - +1.6 393,508 - -1.4 393,565 + +1.0 393,565 + +0.3 393,565 + -0.1 393,565 + +0.6 393,565 + +0.5 393,565 + +0.6 393,565 + +0.9 393,565 + -0.1 393,565 + -1.6 393,565 + +0.1 393,565 + -0.7 393,565 + -1.9 393,566 - -1.6 393,566 - -1.2 393,566 - +2.0 393,566 - -1.4 393,566 - +0.1 393,566 - -0.3 393,566 - -1.2 393,566 - -0.9 393,566 - -0.9 393,566 - -0.9 393,566 - +0.9 393,566 - +1.6 393,566 - +0.5 393,566 - +1.4 393,566 - -0.4 393,567 + +0.0 393,567 + +0.6 393,567 + +0.3 393,567 + -0.8 393,567 + -0.1 393,567 + -0.4 393,567 + -0.5 393,567 + -1.6 393,567 + +0.5 393,567 + -0.1 393,567 + -0.2 393,567 + -0.9 393,567 + -2.7 393,567 + +0.5 393,567 + -0.5 393,568 - -1.1 393,568 - -1.7 393,568 - -1.4 393,568 - +0.4 393,568 - +0.6 393,568 - +0.8 393,568 - -1.1 393,569 + -1.4 393,569 + +1.0 393,569 + -1.4 393,569 + +0.9 393,569 + +1.8 393,569 + +0.2 393,569 + +1.0 393,569 + -0.3 393,570 - -0.7 393,570 - -0.8 393,570 - +0.6 393,570 - -0.1 393,570 - +0.8 393,570 - +1.1 393,570 - +2.3 393,570 - +0.0 393,579 + -0.9 393,579 + -0.1 393,579 + -0.6 393,579 + +0.9 393,580 - -0.3 393,580 - +0.7 393,580 - +1.3 393,580 - -0.6 393,581 + +0.1 393,581 + +1.6 393,581 + +1.6 393,581 + +0.9 393,581 + +0.6 393,581 + -1.4 393,581 + +0.8 393,581 + +0.7 393,581 + +0.5 393,581 + -1.4 393,581 + -0.4 393,581 + +1.3 393,581 + +0.3 393,581 + +0.9 393,582 - +0.4 393,582 - +2.6 393,582 - +0.2 393,582 - -1.3 393,582 - -1.1 393,582 - +1.2 393,582 - +1.3 393,582 - +0.3 393,582 - -0.7 393,582 - -0.4 393,582 - -2.5 393,591 + -0.9 393,591 + +0.9 393,591 + -0.0 393,591 + -0.6 393,591 + +0.4 393,591 + -0.4 393,591 + +1.3 393,592 - -0.7 393,592 - -1.2 393,592 - +0.2 393,753 - +1.4 393,759 - -1.6 393,874 - AO353_01865 0.17 -2.0 393,874 - AO353_01865 0.17 +0.1 393,890 + AO353_01865 0.18 +0.5 393,890 + AO353_01865 0.18 +0.4 393,890 + AO353_01865 0.18 +0.5 393,891 - AO353_01865 0.18 +1.1 393,891 - AO353_01865 0.18 -1.9 393,891 - AO353_01865 0.18 +0.5 394,086 - AO353_01865 0.30 -0.5 394,086 - AO353_01865 0.30 -0.2 394,160 - AO353_01865 0.34 +0.6 394,185 + AO353_01865 0.36 +0.2 394,185 + AO353_01865 0.36 -2.1 394,185 + AO353_01865 0.36 -2.6 394,186 - AO353_01865 0.36 +0.6 394,186 - AO353_01865 0.36 -0.5
Or see this region's nucleotide sequence