Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18850 and ABZR86_RS18855 are separated by 1 nucleotides ABZR86_RS18855 and ABZR86_RS18860 overlap by 4 nucleotides ABZR86_RS18860 and ABZR86_RS18865 are separated by 206 nucleotides
ABZR86_RS18850: ABZR86_RS18850 - MlaD family protein, at 199,651 to 200,589
_RS18850
ABZR86_RS18855: ABZR86_RS18855 - ATP-binding cassette domain-containing protein, at 200,591 to 201,403
_RS18855
ABZR86_RS18860: ABZR86_RS18860 - ABC transporter permease, at 201,400 to 202,545
_RS18860
ABZR86_RS18865: ABZR86_RS18865 - sulfate adenylyltransferase subunit CysD, at 202,752 to 203,669
_RS18865
Position (kb) 201
202
203 Strain fitness (log2 ratio) -2
-1
0
1 at 200.415 kb on - strand, within ABZR86_RS18850 at 200.472 kb on - strand, within ABZR86_RS18850 at 200.655 kb on + strand at 200.655 kb on + strand at 200.656 kb on - strand at 200.656 kb on - strand at 200.757 kb on + strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.961 kb on + strand, within ABZR86_RS18855 at 200.961 kb on + strand, within ABZR86_RS18855 at 200.962 kb on - strand, within ABZR86_RS18855 at 201.728 kb on - strand, within ABZR86_RS18860 at 201.927 kb on + strand, within ABZR86_RS18860 at 201.928 kb on - strand, within ABZR86_RS18860 at 201.928 kb on - strand, within ABZR86_RS18860 at 201.929 kb on + strand, within ABZR86_RS18860 at 201.929 kb on + strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 202.451 kb on + strand at 202.452 kb on - strand at 202.558 kb on + strand at 202.559 kb on - strand at 202.559 kb on - strand at 202.561 kb on - strand at 202.580 kb on - strand at 202.580 kb on - strand at 202.860 kb on + strand, within ABZR86_RS18865 at 202.860 kb on + strand, within ABZR86_RS18865 at 203.090 kb on + strand, within ABZR86_RS18865 at 203.090 kb on + strand, within ABZR86_RS18865 at 203.091 kb on - strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.137 kb on - strand, within ABZR86_RS18865 at 203.137 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.309 kb on - strand, within ABZR86_RS18865 at 203.349 kb on + strand, within ABZR86_RS18865 at 203.349 kb on + strand, within ABZR86_RS18865 at 203.386 kb on - strand, within ABZR86_RS18865 at 203.407 kb on + strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.410 kb on + strand, within ABZR86_RS18865 at 203.411 kb on - strand, within ABZR86_RS18865 at 203.411 kb on - strand, within ABZR86_RS18865
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 200,415 - ABZR86_RS18850 0.81 +0.2 200,472 - ABZR86_RS18850 0.87 -0.1 200,655 + +1.2 200,655 + +0.6 200,656 - -0.7 200,656 - +0.6 200,757 + ABZR86_RS18855 0.20 -0.2 200,758 - ABZR86_RS18855 0.21 +0.3 200,758 - ABZR86_RS18855 0.21 -0.2 200,758 - ABZR86_RS18855 0.21 +0.3 200,961 + ABZR86_RS18855 0.46 -1.1 200,961 + ABZR86_RS18855 0.46 +0.3 200,962 - ABZR86_RS18855 0.46 -0.5 201,728 - ABZR86_RS18860 0.29 +0.3 201,927 + ABZR86_RS18860 0.46 +0.2 201,928 - ABZR86_RS18860 0.46 -1.1 201,928 - ABZR86_RS18860 0.46 -0.5 201,929 + ABZR86_RS18860 0.46 -0.2 201,929 + ABZR86_RS18860 0.46 -2.3 201,930 - ABZR86_RS18860 0.46 +0.2 201,930 - ABZR86_RS18860 0.46 -0.2 201,930 - ABZR86_RS18860 0.46 +0.4 201,930 - ABZR86_RS18860 0.46 -1.1 201,930 - ABZR86_RS18860 0.46 -0.7 201,930 - ABZR86_RS18860 0.46 +0.6 202,451 + -0.3 202,452 - -0.6 202,558 + -0.5 202,559 - -0.1 202,559 - +0.9 202,561 - +0.4 202,580 - -0.1 202,580 - -0.6 202,860 + ABZR86_RS18865 0.12 +0.7 202,860 + ABZR86_RS18865 0.12 -0.4 203,090 + ABZR86_RS18865 0.37 -1.0 203,090 + ABZR86_RS18865 0.37 +0.7 203,091 - ABZR86_RS18865 0.37 -0.3 203,136 + ABZR86_RS18865 0.42 +0.4 203,136 + ABZR86_RS18865 0.42 -0.3 203,136 + ABZR86_RS18865 0.42 -0.6 203,137 - ABZR86_RS18865 0.42 -1.0 203,137 - ABZR86_RS18865 0.42 -0.4 203,272 - ABZR86_RS18865 0.57 -0.2 203,272 - ABZR86_RS18865 0.57 +0.5 203,272 - ABZR86_RS18865 0.57 +0.4 203,272 - ABZR86_RS18865 0.57 +1.0 203,272 - ABZR86_RS18865 0.57 +0.2 203,309 - ABZR86_RS18865 0.61 -1.8 203,349 + ABZR86_RS18865 0.65 +0.3 203,349 + ABZR86_RS18865 0.65 -0.1 203,386 - ABZR86_RS18865 0.69 +0.2 203,407 + ABZR86_RS18865 0.71 +0.3 203,408 - ABZR86_RS18865 0.71 +1.2 203,408 - ABZR86_RS18865 0.71 +0.1 203,408 - ABZR86_RS18865 0.71 +0.1 203,410 + ABZR86_RS18865 0.72 +0.2 203,411 - ABZR86_RS18865 0.72 +0.5 203,411 - ABZR86_RS18865 0.72 +0.1
Or see this region's nucleotide sequence