Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18080 and ABZR86_RS18085 are separated by 195 nucleotides ABZR86_RS18085 and ABZR86_RS18090 are separated by 25 nucleotides ABZR86_RS18090 and ABZR86_RS18095 are separated by 3 nucleotides ABZR86_RS18095 and ABZR86_RS18100 are separated by 183 nucleotides
ABZR86_RS18080: ABZR86_RS18080 - sulfotransferase, at 31,865 to 32,791
_RS18080
ABZR86_RS18085: ABZR86_RS18085 - putative toxin-antitoxin system toxin component, PIN family, at 32,987 to 33,463
_RS18085
ABZR86_RS18090: ABZR86_RS18090 - CPXCG motif-containing cysteine-rich protein, at 33,489 to 33,674
_RS18090
ABZR86_RS18095: ABZR86_RS18095 - bifunctional nicotinamidase/pyrazinamidase, at 33,678 to 34,328
_RS18095
ABZR86_RS18100: ABZR86_RS18100 - hypothetical protein, at 34,512 to 34,895
_RS18100
Position (kb) 33
34 Strain fitness (log2 ratio) -2
-1
0
1 at 32.586 kb on + strand, within ABZR86_RS18080 at 32.912 kb on + strand at 33.023 kb on + strand at 33.478 kb on - strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.508 kb on - strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.866 kb on - strand, within ABZR86_RS18095 at 33.866 kb on - strand, within ABZR86_RS18095 at 33.958 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.091 kb on - strand, within ABZR86_RS18095 at 34.365 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.491 kb on - strand at 34.507 kb on + strand at 34.507 kb on + strand at 34.508 kb on - strand at 34.518 kb on + strand at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 32,586 + ABZR86_RS18080 0.78 +1.1 32,912 + -0.9 33,023 + -1.3 33,478 - -0.3 33,507 + -0.3 33,507 + +0.0 33,507 + +0.1 33,507 + +0.5 33,508 - ABZR86_RS18090 0.10 +0.0 33,570 + ABZR86_RS18090 0.44 -0.2 33,570 + ABZR86_RS18090 0.44 -0.7 33,570 + ABZR86_RS18090 0.44 -0.2 33,570 + ABZR86_RS18090 0.44 -0.3 33,570 + ABZR86_RS18090 0.44 -0.1 33,570 + ABZR86_RS18090 0.44 -0.6 33,570 + ABZR86_RS18090 0.44 -0.7 33,570 + ABZR86_RS18090 0.44 -0.6 33,570 + ABZR86_RS18090 0.44 -0.5 33,570 + ABZR86_RS18090 0.44 -2.5 33,570 + ABZR86_RS18090 0.44 +0.0 33,570 + ABZR86_RS18090 0.44 -0.6 33,570 + ABZR86_RS18090 0.44 +0.0 33,571 - ABZR86_RS18090 0.44 -0.5 33,571 - ABZR86_RS18090 0.44 -0.5 33,571 - ABZR86_RS18090 0.44 -0.7 33,571 - ABZR86_RS18090 0.44 +0.5 33,571 - ABZR86_RS18090 0.44 -0.2 33,865 + ABZR86_RS18095 0.29 -0.6 33,865 + ABZR86_RS18095 0.29 -0.1 33,865 + ABZR86_RS18095 0.29 -0.6 33,865 + ABZR86_RS18095 0.29 -0.1 33,865 + ABZR86_RS18095 0.29 -0.0 33,866 - ABZR86_RS18095 0.29 -0.6 33,866 - ABZR86_RS18095 0.29 -1.1 33,958 + ABZR86_RS18095 0.43 +0.2 34,090 + ABZR86_RS18095 0.63 +0.5 34,090 + ABZR86_RS18095 0.63 -0.4 34,091 - ABZR86_RS18095 0.63 -0.2 34,365 + +0.4 34,475 + -0.4 34,475 + +0.4 34,475 + -0.3 34,476 - -0.1 34,476 - +0.0 34,476 - +0.5 34,476 - -0.4 34,476 - -0.1 34,476 - -0.8 34,491 - -0.4 34,507 + +0.1 34,507 + -0.1 34,508 - +0.3 34,518 + +0.4 34,600 - ABZR86_RS18100 0.23 -0.5 34,600 - ABZR86_RS18100 0.23 +0.1 34,600 - ABZR86_RS18100 0.23 -0.4
Or see this region's nucleotide sequence