Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03675

Experiment: nitrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03670 and ABZR86_RS03675 are separated by 87 nucleotidesABZR86_RS03675 and ABZR86_RS03680 are separated by 83 nucleotides ABZR86_RS03670: ABZR86_RS03670 - protease pro-enzyme activation domain-containing protein, at 801,025 to 803,226 _RS03670 ABZR86_RS03675: ABZR86_RS03675 - TetR/AcrR family transcriptional regulator, at 803,314 to 803,970 _RS03675 ABZR86_RS03680: ABZR86_RS03680 - FAD-dependent monooxygenase, at 804,054 to 805,571 _RS03680 Position (kb) 803 804Strain fitness (log2 ratio) -2 -1 0 1 2at 802.357 kb on + strand, within ABZR86_RS03670at 802.357 kb on + strand, within ABZR86_RS03670at 802.358 kb on - strand, within ABZR86_RS03670at 802.384 kb on - strand, within ABZR86_RS03670at 802.487 kb on + strand, within ABZR86_RS03670at 802.488 kb on - strand, within ABZR86_RS03670at 802.488 kb on - strand, within ABZR86_RS03670at 802.675 kb on + strand, within ABZR86_RS03670at 802.675 kb on + strand, within ABZR86_RS03670at 802.675 kb on + strand, within ABZR86_RS03670at 802.676 kb on - strand, within ABZR86_RS03670at 802.676 kb on - strand, within ABZR86_RS03670at 802.676 kb on - strand, within ABZR86_RS03670at 802.676 kb on - strand, within ABZR86_RS03670at 802.732 kb on + strand, within ABZR86_RS03670at 802.759 kb on + strand, within ABZR86_RS03670at 802.759 kb on + strand, within ABZR86_RS03670at 802.759 kb on + strand, within ABZR86_RS03670at 802.760 kb on - strand, within ABZR86_RS03670at 802.769 kb on + strand, within ABZR86_RS03670at 802.769 kb on + strand, within ABZR86_RS03670at 802.770 kb on - strand, within ABZR86_RS03670at 802.770 kb on - strand, within ABZR86_RS03670at 802.770 kb on - strand, within ABZR86_RS03670at 802.770 kb on - strand, within ABZR86_RS03670at 802.770 kb on - strand, within ABZR86_RS03670at 802.775 kb on - strand, within ABZR86_RS03670at 802.844 kb on - strand, within ABZR86_RS03670at 802.879 kb on + strand, within ABZR86_RS03670at 802.879 kb on + strand, within ABZR86_RS03670at 802.880 kb on - strand, within ABZR86_RS03670at 802.880 kb on - strand, within ABZR86_RS03670at 802.887 kb on + strand, within ABZR86_RS03670at 802.888 kb on - strand, within ABZR86_RS03670at 802.921 kb on + strand, within ABZR86_RS03670at 802.922 kb on - strand, within ABZR86_RS03670at 802.944 kb on + strand, within ABZR86_RS03670at 803.005 kb on + strand, within ABZR86_RS03670at 803.176 kb on - strandat 803.230 kb on + strandat 803.230 kb on + strandat 803.230 kb on + strandat 803.230 kb on + strandat 803.230 kb on + strandat 803.230 kb on + strandat 803.231 kb on - strandat 803.231 kb on - strandat 803.231 kb on - strandat 803.231 kb on - strandat 803.267 kb on + strandat 803.267 kb on + strandat 803.268 kb on - strandat 803.268 kb on - strandat 803.268 kb on - strandat 803.315 kb on + strandat 803.339 kb on + strandat 803.339 kb on + strandat 803.340 kb on - strandat 803.451 kb on - strand, within ABZR86_RS03675at 803.451 kb on - strand, within ABZR86_RS03675at 803.451 kb on - strand, within ABZR86_RS03675at 803.798 kb on + strand, within ABZR86_RS03675at 804.357 kb on + strand, within ABZR86_RS03680at 804.358 kb on - strand, within ABZR86_RS03680at 804.358 kb on - strand, within ABZR86_RS03680at 804.358 kb on - strand, within ABZR86_RS03680at 804.390 kb on + strand, within ABZR86_RS03680at 804.715 kb on - strand, within ABZR86_RS03680at 804.715 kb on - strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.806 kb on + strand, within ABZR86_RS03680at 804.806 kb on + strand, within ABZR86_RS03680at 804.829 kb on + strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.918 kb on + strand, within ABZR86_RS03680at 804.918 kb on + strand, within ABZR86_RS03680

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Per-strain Table

Position Strand Gene LocusTag Fraction nitrate (N)
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802,357 + ABZR86_RS03670 0.60 +0.2
802,357 + ABZR86_RS03670 0.60 +0.9
802,358 - ABZR86_RS03670 0.61 +0.4
802,384 - ABZR86_RS03670 0.62 +1.1
802,487 + ABZR86_RS03670 0.66 +0.4
802,488 - ABZR86_RS03670 0.66 +0.7
802,488 - ABZR86_RS03670 0.66 +0.9
802,675 + ABZR86_RS03670 0.75 +0.8
802,675 + ABZR86_RS03670 0.75 -0.2
802,675 + ABZR86_RS03670 0.75 -1.2
802,676 - ABZR86_RS03670 0.75 +0.5
802,676 - ABZR86_RS03670 0.75 -0.0
802,676 - ABZR86_RS03670 0.75 +1.0
802,676 - ABZR86_RS03670 0.75 +0.9
802,732 + ABZR86_RS03670 0.78 -0.5
802,759 + ABZR86_RS03670 0.79 -0.1
802,759 + ABZR86_RS03670 0.79 -1.1
802,759 + ABZR86_RS03670 0.79 -0.1
802,760 - ABZR86_RS03670 0.79 +0.4
802,769 + ABZR86_RS03670 0.79 +1.9
802,769 + ABZR86_RS03670 0.79 -2.1
802,770 - ABZR86_RS03670 0.79 -0.2
802,770 - ABZR86_RS03670 0.79 -0.2
802,770 - ABZR86_RS03670 0.79 +0.3
802,770 - ABZR86_RS03670 0.79 -0.7
802,770 - ABZR86_RS03670 0.79 +0.5
802,775 - ABZR86_RS03670 0.79 +0.3
802,844 - ABZR86_RS03670 0.83 -0.4
802,879 + ABZR86_RS03670 0.84 +0.5
802,879 + ABZR86_RS03670 0.84 -0.2
802,880 - ABZR86_RS03670 0.84 -0.2
802,880 - ABZR86_RS03670 0.84 +0.1
802,887 + ABZR86_RS03670 0.85 +0.3
802,888 - ABZR86_RS03670 0.85 +0.5
802,921 + ABZR86_RS03670 0.86 +0.6
802,922 - ABZR86_RS03670 0.86 -1.0
802,944 + ABZR86_RS03670 0.87 -0.5
803,005 + ABZR86_RS03670 0.90 +0.5
803,176 - +0.8
803,230 + -0.0
803,230 + -0.4
803,230 + +0.0
803,230 + +0.9
803,230 + +0.6
803,230 + +0.2
803,231 - -1.9
803,231 - -1.3
803,231 - +0.4
803,231 - +0.3
803,267 + +0.2
803,267 + -0.2
803,268 - +0.5
803,268 - -0.3
803,268 - -0.8
803,315 + +0.0
803,339 + -0.6
803,339 + +0.0
803,340 - -0.7
803,451 - ABZR86_RS03675 0.21 +0.4
803,451 - ABZR86_RS03675 0.21 +0.2
803,451 - ABZR86_RS03675 0.21 +1.1
803,798 + ABZR86_RS03675 0.74 -0.1
804,357 + ABZR86_RS03680 0.20 -0.3
804,358 - ABZR86_RS03680 0.20 +0.4
804,358 - ABZR86_RS03680 0.20 -0.3
804,358 - ABZR86_RS03680 0.20 -0.2
804,390 + ABZR86_RS03680 0.22 +0.5
804,715 - ABZR86_RS03680 0.44 +0.2
804,715 - ABZR86_RS03680 0.44 -0.0
804,732 + ABZR86_RS03680 0.45 +0.2
804,732 + ABZR86_RS03680 0.45 +0.5
804,732 + ABZR86_RS03680 0.45 +0.3
804,732 + ABZR86_RS03680 0.45 +2.7
804,733 - ABZR86_RS03680 0.45 +0.1
804,733 - ABZR86_RS03680 0.45 -0.7
804,733 - ABZR86_RS03680 0.45 +0.6
804,733 - ABZR86_RS03680 0.45 +0.8
804,733 - ABZR86_RS03680 0.45 -0.5
804,733 - ABZR86_RS03680 0.45 -0.4
804,738 + ABZR86_RS03680 0.45 +0.2
804,738 + ABZR86_RS03680 0.45 +0.1
804,738 + ABZR86_RS03680 0.45 -0.0
804,739 - ABZR86_RS03680 0.45 +0.6
804,739 - ABZR86_RS03680 0.45 +0.3
804,739 - ABZR86_RS03680 0.45 -0.5
804,806 + ABZR86_RS03680 0.50 -1.2
804,806 + ABZR86_RS03680 0.50 -0.6
804,829 + ABZR86_RS03680 0.51 +0.6
804,830 - ABZR86_RS03680 0.51 -0.3
804,830 - ABZR86_RS03680 0.51 +0.0
804,830 - ABZR86_RS03680 0.51 -0.6
804,918 + ABZR86_RS03680 0.57 +0.3
804,918 + ABZR86_RS03680 0.57 -0.3

Or see this region's nucleotide sequence