Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03300 and ABZR86_RS03305 are separated by 67 nucleotides ABZR86_RS03305 and ABZR86_RS03310 are separated by 196 nucleotides ABZR86_RS03310 and ABZR86_RS03315 are separated by 5 nucleotides
ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983
_RS03300
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
ABZR86_RS03310: ABZR86_RS03310 - phage tail protein, at 696,636 to 697,076
_RS03310
ABZR86_RS03315: ABZR86_RS03315 - phage tail protein, at 697,082 to 697,537
_RS03315
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.712 kb on + strand, within ABZR86_RS03300 at 694.820 kb on - strand, within ABZR86_RS03300 at 694.975 kb on + strand at 694.976 kb on - strand at 694.976 kb on - strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.982 kb on - strand at 695.044 kb on - strand at 695.057 kb on + strand at 695.075 kb on + strand at 695.352 kb on - strand, within ABZR86_RS03305 at 695.366 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.394 kb on - strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.507 kb on + strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 696.598 kb on - strand at 696.652 kb on - strand at 697.091 kb on + strand at 697.092 kb on - strand at 697.112 kb on + strand at 697.115 kb on + strand at 697.116 kb on - strand at 697.199 kb on + strand, within ABZR86_RS03315 at 697.268 kb on + strand, within ABZR86_RS03315
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 694,282 + ABZR86_RS03300 0.31 -0.8 694,282 + ABZR86_RS03300 0.31 +0.0 694,712 + ABZR86_RS03300 0.73 -1.7 694,820 - ABZR86_RS03300 0.84 +0.2 694,975 + -0.3 694,976 - -0.9 694,976 - +0.7 694,981 + +0.3 694,981 + -1.0 694,981 + +0.8 694,982 - -0.1 695,044 - +0.2 695,057 + +0.4 695,075 + +0.1 695,352 - ABZR86_RS03305 0.22 -0.6 695,366 + ABZR86_RS03305 0.23 +0.5 695,393 + ABZR86_RS03305 0.25 +0.6 695,393 + ABZR86_RS03305 0.25 +0.1 695,394 - ABZR86_RS03305 0.25 +0.4 695,414 + ABZR86_RS03305 0.26 -1.2 695,414 + ABZR86_RS03305 0.26 -1.8 695,507 + ABZR86_RS03305 0.33 +0.6 695,508 - ABZR86_RS03305 0.33 -0.0 695,508 - ABZR86_RS03305 0.33 +0.1 695,823 - ABZR86_RS03305 0.56 +0.3 695,823 - ABZR86_RS03305 0.56 +0.1 695,943 - ABZR86_RS03305 0.64 +0.2 695,943 - ABZR86_RS03305 0.64 -0.3 696,598 - -0.0 696,652 - -0.3 697,091 + -0.8 697,092 - -0.5 697,112 + +0.0 697,115 + +0.0 697,116 - -0.3 697,199 + ABZR86_RS03315 0.26 -1.2 697,268 + ABZR86_RS03315 0.41 -0.3
Or see this region's nucleotide sequence