Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01055 and ABZR86_RS01060 are separated by 51 nucleotides ABZR86_RS01060 and ABZR86_RS01065 are separated by 131 nucleotides
ABZR86_RS01055: ABZR86_RS01055 - CHASE2 domain-containing protein, at 207,740 to 208,891
_RS01055
ABZR86_RS01060: ABZR86_RS01060 - FecR domain-containing protein, at 208,943 to 210,640
_RS01060
ABZR86_RS01065: ABZR86_RS01065 - ATP-binding protein, at 210,772 to 213,354
_RS01065
Position (kb) 208
209
210
211 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.177 kb on - strand, within ABZR86_RS01055 at 208.177 kb on - strand, within ABZR86_RS01055 at 208.227 kb on + strand, within ABZR86_RS01055 at 208.227 kb on + strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.248 kb on + strand, within ABZR86_RS01055 at 208.248 kb on + strand, within ABZR86_RS01055 at 208.604 kb on - strand, within ABZR86_RS01055 at 208.746 kb on + strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.772 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 209.000 kb on + strand at 209.046 kb on + strand at 209.046 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.131 kb on + strand, within ABZR86_RS01060 at 209.184 kb on + strand, within ABZR86_RS01060 at 209.185 kb on - strand, within ABZR86_RS01060 at 209.305 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.352 kb on + strand, within ABZR86_RS01060 at 209.352 kb on + strand, within ABZR86_RS01060 at 209.353 kb on - strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.461 kb on - strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.742 kb on + strand, within ABZR86_RS01060 at 210.031 kb on + strand, within ABZR86_RS01060 at 210.170 kb on + strand, within ABZR86_RS01060 at 210.171 kb on - strand, within ABZR86_RS01060 at 210.171 kb on - strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.420 kb on + strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.421 kb on - strand, within ABZR86_RS01060 at 210.460 kb on - strand, within ABZR86_RS01060 at 210.505 kb on - strand at 210.594 kb on + strand at 210.594 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.633 kb on + strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.634 kb on - strand at 210.769 kb on + strand at 210.769 kb on + strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.770 kb on - strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.773 kb on + strand at 210.774 kb on - strand at 210.774 kb on - strand at 210.774 kb on - strand at 210.774 kb on - strand at 211.096 kb on - strand, within ABZR86_RS01065 at 211.403 kb on + strand, within ABZR86_RS01065 at 211.404 kb on - strand, within ABZR86_RS01065 at 211.404 kb on - strand, within ABZR86_RS01065
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 208,176 + ABZR86_RS01055 0.38 -0.7 208,176 + ABZR86_RS01055 0.38 -0.1 208,176 + ABZR86_RS01055 0.38 +0.8 208,176 + ABZR86_RS01055 0.38 -0.2 208,177 - ABZR86_RS01055 0.38 +0.4 208,177 - ABZR86_RS01055 0.38 +1.8 208,227 + ABZR86_RS01055 0.42 +0.6 208,227 + ABZR86_RS01055 0.42 +0.1 208,228 - ABZR86_RS01055 0.42 +0.0 208,228 - ABZR86_RS01055 0.42 +2.0 208,228 - ABZR86_RS01055 0.42 -0.4 208,228 - ABZR86_RS01055 0.42 +0.0 208,228 - ABZR86_RS01055 0.42 -0.1 208,248 + ABZR86_RS01055 0.44 +0.5 208,248 + ABZR86_RS01055 0.44 +0.0 208,604 - ABZR86_RS01055 0.75 -0.1 208,746 + ABZR86_RS01055 0.87 +0.6 208,747 - ABZR86_RS01055 0.87 -0.7 208,747 - ABZR86_RS01055 0.87 +0.8 208,747 - ABZR86_RS01055 0.87 -0.4 208,747 - ABZR86_RS01055 0.87 +0.4 208,747 - ABZR86_RS01055 0.87 -0.4 208,772 + ABZR86_RS01055 0.90 -1.0 208,773 + ABZR86_RS01055 0.90 -0.4 208,773 + ABZR86_RS01055 0.90 +0.0 208,773 + ABZR86_RS01055 0.90 -0.2 208,774 - ABZR86_RS01055 0.90 +0.5 208,774 - ABZR86_RS01055 0.90 +1.2 208,774 - ABZR86_RS01055 0.90 +0.0 208,774 - ABZR86_RS01055 0.90 -0.1 208,774 - ABZR86_RS01055 0.90 +1.2 208,774 - ABZR86_RS01055 0.90 -1.2 208,774 - ABZR86_RS01055 0.90 -0.4 209,000 + +0.5 209,046 + +0.2 209,046 + +0.1 209,079 + +0.6 209,079 + -0.6 209,079 + +0.7 209,079 + -0.4 209,079 + -0.9 209,079 + +0.1 209,080 - -0.2 209,080 - -0.3 209,080 - -0.5 209,080 - -0.2 209,131 + ABZR86_RS01060 0.11 -0.1 209,184 + ABZR86_RS01060 0.14 +0.1 209,185 - ABZR86_RS01060 0.14 -3.2 209,305 - ABZR86_RS01060 0.21 +0.0 209,350 - ABZR86_RS01060 0.24 -0.2 209,350 - ABZR86_RS01060 0.24 +0.1 209,350 - ABZR86_RS01060 0.24 +0.3 209,352 + ABZR86_RS01060 0.24 +0.2 209,352 + ABZR86_RS01060 0.24 +0.2 209,353 - ABZR86_RS01060 0.24 +0.5 209,460 + ABZR86_RS01060 0.30 +0.3 209,460 + ABZR86_RS01060 0.30 +0.6 209,460 + ABZR86_RS01060 0.30 -0.1 209,461 - ABZR86_RS01060 0.31 +0.4 209,640 + ABZR86_RS01060 0.41 -0.3 209,640 + ABZR86_RS01060 0.41 -0.2 209,640 + ABZR86_RS01060 0.41 -0.3 209,640 + ABZR86_RS01060 0.41 +0.5 209,641 - ABZR86_RS01060 0.41 -0.6 209,641 - ABZR86_RS01060 0.41 +0.8 209,641 - ABZR86_RS01060 0.41 -0.7 209,641 - ABZR86_RS01060 0.41 -0.1 209,641 - ABZR86_RS01060 0.41 +0.9 209,641 - ABZR86_RS01060 0.41 +0.9 209,742 + ABZR86_RS01060 0.47 +0.2 210,031 + ABZR86_RS01060 0.64 +0.1 210,170 + ABZR86_RS01060 0.72 +0.2 210,171 - ABZR86_RS01060 0.72 +0.5 210,171 - ABZR86_RS01060 0.72 -1.8 210,420 + ABZR86_RS01060 0.87 -0.0 210,420 + ABZR86_RS01060 0.87 -0.4 210,420 + ABZR86_RS01060 0.87 -0.3 210,420 + ABZR86_RS01060 0.87 -2.4 210,421 - ABZR86_RS01060 0.87 +0.8 210,421 - ABZR86_RS01060 0.87 +0.7 210,421 - ABZR86_RS01060 0.87 +1.0 210,460 - ABZR86_RS01060 0.89 -0.3 210,505 - +0.2 210,594 + +0.0 210,594 + -0.8 210,633 + +0.5 210,633 + +0.3 210,633 + +1.1 210,633 + -0.0 210,633 + +0.7 210,633 + -0.5 210,633 + -0.1 210,633 + +0.4 210,633 + +0.2 210,633 + -0.6 210,633 + +0.3 210,634 - -0.5 210,634 - -0.4 210,634 - +0.8 210,634 - -0.2 210,634 - -1.3 210,634 - -0.1 210,634 - -1.0 210,769 + -0.3 210,769 + -0.9 210,770 - -0.9 210,770 - +0.3 210,770 - -0.5 210,770 - -0.1 210,773 + +0.1 210,773 + +0.1 210,773 + -0.3 210,773 + +0.6 210,773 + +0.3 210,773 + -1.0 210,774 - -0.1 210,774 - +0.1 210,774 - +0.1 210,774 - -0.1 211,096 - ABZR86_RS01065 0.13 +0.0 211,403 + ABZR86_RS01065 0.24 +0.4 211,404 - ABZR86_RS01065 0.24 -0.2 211,404 - ABZR86_RS01065 0.24 +0.6
Or see this region's nucleotide sequence