Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00575 and ABZR86_RS00580 are separated by 116 nucleotides ABZR86_RS00580 and ABZR86_RS00585 are separated by 97 nucleotides
ABZR86_RS00575: ABZR86_RS00575 - tRNA glutamyl-Q(34) synthetase GluQRS, at 108,627 to 109,493
_RS00575
ABZR86_RS00580: ABZR86_RS00580 - protease HtpX, at 109,610 to 110,500
_RS00580
ABZR86_RS00585: ABZR86_RS00585 - molecular chaperone HtpG, at 110,598 to 112,460
_RS00585
Position (kb) 109
110
111 Strain fitness (log2 ratio) -2
-1
0
1
2 at 108.856 kb on + strand, within ABZR86_RS00575 at 108.857 kb on - strand, within ABZR86_RS00575 at 108.985 kb on + strand, within ABZR86_RS00575 at 108.986 kb on - strand, within ABZR86_RS00575 at 108.991 kb on + strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 109.250 kb on - strand, within ABZR86_RS00575 at 109.486 kb on + strand at 109.487 kb on - strand at 109.487 kb on - strand at 109.504 kb on + strand at 109.504 kb on + strand at 109.504 kb on + strand at 109.557 kb on + strand at 109.636 kb on + strand at 109.636 kb on + strand at 109.636 kb on + strand at 109.637 kb on - strand at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.926 kb on - strand, within ABZR86_RS00580 at 109.926 kb on - strand, within ABZR86_RS00580 at 110.110 kb on + strand, within ABZR86_RS00580 at 110.111 kb on - strand, within ABZR86_RS00580 at 110.205 kb on - strand, within ABZR86_RS00580 at 110.205 kb on - strand, within ABZR86_RS00580 at 110.550 kb on + strand at 110.550 kb on + strand at 110.551 kb on - strand at 110.551 kb on - strand at 110.668 kb on - strand at 110.976 kb on + strand, within ABZR86_RS00585 at 111.192 kb on + strand, within ABZR86_RS00585 at 111.324 kb on + strand, within ABZR86_RS00585 at 111.325 kb on - strand, within ABZR86_RS00585 at 111.325 kb on - strand, within ABZR86_RS00585 at 111.336 kb on + strand, within ABZR86_RS00585 at 111.336 kb on + strand, within ABZR86_RS00585 at 111.336 kb on + strand, within ABZR86_RS00585 at 111.423 kb on + strand, within ABZR86_RS00585 at 111.423 kb on + strand, within ABZR86_RS00585 at 111.423 kb on + strand, within ABZR86_RS00585 at 111.423 kb on + strand, within ABZR86_RS00585 at 111.423 kb on + strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.424 kb on - strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.492 kb on + strand, within ABZR86_RS00585 at 111.493 kb on - strand, within ABZR86_RS00585 at 111.493 kb on - strand, within ABZR86_RS00585 at 111.493 kb on - strand, within ABZR86_RS00585
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 108,856 + ABZR86_RS00575 0.26 +0.3 108,857 - ABZR86_RS00575 0.27 +1.7 108,985 + ABZR86_RS00575 0.41 -0.1 108,986 - ABZR86_RS00575 0.41 +0.4 108,991 + ABZR86_RS00575 0.42 -0.4 108,992 - ABZR86_RS00575 0.42 -0.4 108,992 - ABZR86_RS00575 0.42 +0.3 108,992 - ABZR86_RS00575 0.42 -0.7 108,992 - ABZR86_RS00575 0.42 -0.1 108,992 - ABZR86_RS00575 0.42 -0.8 108,992 - ABZR86_RS00575 0.42 -0.4 109,250 - ABZR86_RS00575 0.72 +0.9 109,486 + +0.4 109,487 - +0.2 109,487 - +2.0 109,504 + +0.2 109,504 + -1.0 109,504 + -0.3 109,557 + -1.9 109,636 + +0.4 109,636 + -0.7 109,636 + -1.1 109,637 - -0.2 109,743 - ABZR86_RS00580 0.15 -0.8 109,743 - ABZR86_RS00580 0.15 +0.1 109,743 - ABZR86_RS00580 0.15 -0.9 109,743 - ABZR86_RS00580 0.15 +0.2 109,926 - ABZR86_RS00580 0.35 +0.3 109,926 - ABZR86_RS00580 0.35 +0.4 110,110 + ABZR86_RS00580 0.56 +0.7 110,111 - ABZR86_RS00580 0.56 -0.2 110,205 - ABZR86_RS00580 0.67 +0.9 110,205 - ABZR86_RS00580 0.67 +0.8 110,550 + -0.3 110,550 + +1.4 110,551 - -0.2 110,551 - -1.9 110,668 - +0.1 110,976 + ABZR86_RS00585 0.20 -0.2 111,192 + ABZR86_RS00585 0.32 +0.7 111,324 + ABZR86_RS00585 0.39 +0.1 111,325 - ABZR86_RS00585 0.39 +1.3 111,325 - ABZR86_RS00585 0.39 -0.1 111,336 + ABZR86_RS00585 0.40 -0.7 111,336 + ABZR86_RS00585 0.40 +0.1 111,336 + ABZR86_RS00585 0.40 -0.0 111,423 + ABZR86_RS00585 0.44 -0.4 111,423 + ABZR86_RS00585 0.44 +0.4 111,423 + ABZR86_RS00585 0.44 -0.8 111,423 + ABZR86_RS00585 0.44 +0.2 111,423 + ABZR86_RS00585 0.44 -0.2 111,424 - ABZR86_RS00585 0.44 +1.1 111,424 - ABZR86_RS00585 0.44 +0.1 111,424 - ABZR86_RS00585 0.44 +0.1 111,424 - ABZR86_RS00585 0.44 +0.0 111,424 - ABZR86_RS00585 0.44 +0.2 111,424 - ABZR86_RS00585 0.44 +1.3 111,424 - ABZR86_RS00585 0.44 -1.5 111,492 + ABZR86_RS00585 0.48 +0.7 111,492 + ABZR86_RS00585 0.48 +0.2 111,492 + ABZR86_RS00585 0.48 +1.2 111,492 + ABZR86_RS00585 0.48 -0.7 111,492 + ABZR86_RS00585 0.48 -0.3 111,492 + ABZR86_RS00585 0.48 +0.6 111,492 + ABZR86_RS00585 0.48 +0.4 111,493 - ABZR86_RS00585 0.48 +0.5 111,493 - ABZR86_RS00585 0.48 +0.3 111,493 - ABZR86_RS00585 0.48 -0.2
Or see this region's nucleotide sequence