Strain Fitness in Shewanella loihica PV-4 around Shew_3090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,670,419	+		Shew_3088	0.79	-0.1
3,670,813	+				-0.9
3,670,813	+				+0.0
3,670,821	-				+0.9
3,670,821	-				+0.2
3,670,821	-				-0.6
3,670,823	+				-0.3
3,670,872	+				+0.9
3,670,880	-				+0.0
3,670,880	-				+0.1
3,671,269	+				+0.0
3,671,325	-		Shew_3090	0.17	-0.8
3,671,819	+		Shew_3091	0.20	+0.6
3,671,880	+		Shew_3091	0.29	+0.3
3,671,986	-		Shew_3091	0.46	-0.4
3,672,141	+		Shew_3091	0.71	-0.1
3,672,182	+		Shew_3091	0.78	+0.0
3,672,434	+				-0.0
3,672,442	-				+1.1
3,672,521	-		Shew_3092	0.13	+0.3