Strain Fitness in Shewanella loihica PV-4 around Shew_3029

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,597,555	-		Shew_3028	0.35	-0.4
3,597,618	+		Shew_3028	0.40	-0.1
3,597,651	-		Shew_3028	0.42	+0.3
3,597,651	-		Shew_3028	0.42	+0.8
3,597,729	+		Shew_3028	0.47	+0.2
3,597,754	-		Shew_3028	0.49	+0.1
3,597,869	+		Shew_3028	0.57	-0.2
3,597,951	-		Shew_3028	0.63	-0.1
3,598,357	-				+0.2
3,598,470	-				+0.3
3,598,501	-				+0.3
3,598,624	-		Shew_3029	0.15	+0.2
3,598,772	+		Shew_3029	0.46	-0.9
3,598,941	-		Shew_3029	0.82	-0.9
3,599,145	-				+0.6
3,599,312	-		Shew_3030	0.22	+0.1
3,599,548	-				+1.4
3,599,554	+				+0.5
3,599,673	-				-0.5
3,599,763	-				-0.2
3,599,858	-				+2.0
3,599,985	-		Shew_3031	0.18	+0.0
3,599,995	-		Shew_3031	0.19	-2.2