Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0646 and Shew_0647 are separated by 14 nucleotides Shew_0647 and Shew_0648 are separated by 7 nucleotides Shew_0648 and Shew_0649 are separated by 4 nucleotides Shew_0649 and Shew_0650 overlap by 1 nucleotides
Shew_0646: Shew_0646 - SAF domain-containing protein (RefSeq), at 735,195 to 736,091
_0646
Shew_0647: Shew_0647 - hypothetical protein (RefSeq), at 736,106 to 736,297
_0647
Shew_0648: Shew_0648 - hypothetical protein (RefSeq), at 736,305 to 736,976
_0648
Shew_0649: Shew_0649 - hypothetical protein (RefSeq), at 736,981 to 737,841
_0649
Shew_0650: Shew_0650 - hypothetical protein (RefSeq), at 737,841 to 739,199
_0650
Position (kb) 736
737 Strain fitness (log2 ratio) -1
0
1 at 735.539 kb on + strand, within Shew_0646 at 735.875 kb on - strand, within Shew_0646 at 735.875 kb on - strand, within Shew_0646 at 735.952 kb on + strand, within Shew_0646 at 736.189 kb on - strand, within Shew_0647 at 736.217 kb on - strand, within Shew_0647 at 736.292 kb on + strand at 736.439 kb on + strand, within Shew_0648 at 736.586 kb on + strand, within Shew_0648 at 736.836 kb on - strand, within Shew_0648 at 736.936 kb on - strand at 736.991 kb on - strand at 737.069 kb on + strand, within Shew_0649 at 737.115 kb on - strand, within Shew_0649 at 737.205 kb on - strand, within Shew_0649 at 737.249 kb on - strand, within Shew_0649 at 737.285 kb on + strand, within Shew_0649 at 737.293 kb on - strand, within Shew_0649 at 737.322 kb on + strand, within Shew_0649 at 737.417 kb on - strand, within Shew_0649 at 737.704 kb on - strand, within Shew_0649 at 737.812 kb on - strand at 737.859 kb on + strand at 737.864 kb on + strand at 737.867 kb on - strand at 737.869 kb on + strand at 737.877 kb on - strand at 737.925 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 735,539 + Shew_0646 0.38 -0.6 735,875 - Shew_0646 0.76 -0.2 735,875 - Shew_0646 0.76 +0.2 735,952 + Shew_0646 0.84 +0.4 736,189 - Shew_0647 0.43 +0.2 736,217 - Shew_0647 0.58 -0.4 736,292 + +0.7 736,439 + Shew_0648 0.20 -0.9 736,586 + Shew_0648 0.42 -0.7 736,836 - Shew_0648 0.79 +0.1 736,936 - -0.2 736,991 - -1.6 737,069 + Shew_0649 0.10 +0.2 737,115 - Shew_0649 0.16 +0.4 737,205 - Shew_0649 0.26 +0.1 737,249 - Shew_0649 0.31 +0.4 737,285 + Shew_0649 0.35 +0.1 737,293 - Shew_0649 0.36 -0.9 737,322 + Shew_0649 0.40 +0.1 737,417 - Shew_0649 0.51 -0.3 737,704 - Shew_0649 0.84 -0.8 737,812 - +0.3 737,859 + -0.3 737,864 + +0.6 737,867 - +0.9 737,869 + +0.3 737,877 - -0.0 737,925 - -0.1
Or see this region's nucleotide sequence