Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3759 and Ac3H11_3760 overlap by 13 nucleotides Ac3H11_3760 and Ac3H11_3761 overlap by 4 nucleotides Ac3H11_3761 and Ac3H11_3762 are separated by 3 nucleotides Ac3H11_3762 and Ac3H11_3763 overlap by 4 nucleotides
Ac3H11_3759 - hypothetical protein, at 12,918 to 13,538
_3759
Ac3H11_3760 - hypothetical protein, at 13,526 to 13,789
_3760
Ac3H11_3761 - hypothetical protein, at 13,786 to 13,968
_3761
Ac3H11_3762 - Eha, at 13,972 to 15,165
_3762
Ac3H11_3763 - Phage transposase, at 15,162 to 16,940
_3763
Position (kb) 13
14
15
16 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 13.180 kb on + strand, within Ac3H11_3759 at 13.180 kb on + strand, within Ac3H11_3759 at 13.180 kb on + strand, within Ac3H11_3759 at 13.394 kb on - strand, within Ac3H11_3759 at 13.394 kb on - strand, within Ac3H11_3759 at 13.680 kb on + strand, within Ac3H11_3760 at 13.751 kb on + strand, within Ac3H11_3760 at 13.751 kb on + strand, within Ac3H11_3760 at 13.752 kb on - strand, within Ac3H11_3760 at 13.958 kb on + strand at 14.069 kb on + strand at 14.168 kb on + strand, within Ac3H11_3762 at 14.168 kb on + strand, within Ac3H11_3762 at 14.168 kb on + strand, within Ac3H11_3762 at 14.364 kb on + strand, within Ac3H11_3762 at 14.604 kb on - strand, within Ac3H11_3762 at 14.866 kb on + strand, within Ac3H11_3762 at 15.787 kb on + strand, within Ac3H11_3763 at 15.787 kb on + strand, within Ac3H11_3763
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 13,180 + Ac3H11_3759 0.42 -0.7 13,180 + Ac3H11_3759 0.42 -0.1 13,180 + Ac3H11_3759 0.42 +2.2 13,394 - Ac3H11_3759 0.77 -2.4 13,394 - Ac3H11_3759 0.77 -0.4 13,680 + Ac3H11_3760 0.58 -0.8 13,751 + Ac3H11_3760 0.85 +0.4 13,751 + Ac3H11_3760 0.85 +0.4 13,752 - Ac3H11_3760 0.86 -0.8 13,958 + +1.8 14,069 + -1.3 14,168 + Ac3H11_3762 0.16 +3.7 14,168 + Ac3H11_3762 0.16 -1.8 14,168 + Ac3H11_3762 0.16 +0.8 14,364 + Ac3H11_3762 0.33 +0.4 14,604 - Ac3H11_3762 0.53 +1.9 14,866 + Ac3H11_3762 0.75 +1.9 15,787 + Ac3H11_3763 0.35 +0.2 15,787 + Ac3H11_3763 0.35 -2.1
Or see this region's nucleotide sequence