Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_274 and Ac3H11_275 are separated by 14 nucleotides Ac3H11_275 and Ac3H11_276 are separated by 83 nucleotides Ac3H11_276 and Ac3H11_277 are separated by 30 nucleotides Ac3H11_277 and Ac3H11_278 are separated by 54 nucleotides
Ac3H11_274 - Probable MFS transporter precursor, at 99,458 to 100,717
_274
Ac3H11_275 - hypothetical protein, at 100,732 to 100,887
_275
Ac3H11_276 - Putative SAM-dependent methyltransferase Bucepa02006346, at 100,971 to 101,525
_276
Ac3H11_277 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 101,556 to 102,455
_277
Ac3H11_278 - FIG002207: Probable transmembrane protein, at 102,510 to 103,604
_278
Position (kb) 100
101
102 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 100.172 kb on + strand, within Ac3H11_274 at 100.173 kb on - strand, within Ac3H11_274 at 100.223 kb on + strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.293 kb on + strand, within Ac3H11_274 at 100.293 kb on + strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.358 kb on - strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.592 kb on + strand at 100.592 kb on + strand at 100.592 kb on + strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.615 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.950 kb on - strand at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.298 kb on + strand, within Ac3H11_276 at 101.298 kb on + strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.409 kb on + strand, within Ac3H11_276 at 101.410 kb on - strand, within Ac3H11_276 at 101.519 kb on + strand at 101.519 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.536 kb on + strand at 101.536 kb on + strand at 101.579 kb on + strand at 101.579 kb on + strand at 101.634 kb on + strand at 101.666 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 100,172 + Ac3H11_274 0.57 -0.3 100,173 - Ac3H11_274 0.57 +1.6 100,223 + Ac3H11_274 0.61 -2.2 100,224 - Ac3H11_274 0.61 -1.5 100,224 - Ac3H11_274 0.61 +0.2 100,224 - Ac3H11_274 0.61 +1.3 100,262 + Ac3H11_274 0.64 +0.6 100,262 + Ac3H11_274 0.64 +1.3 100,262 + Ac3H11_274 0.64 +1.8 100,262 + Ac3H11_274 0.64 -0.9 100,262 + Ac3H11_274 0.64 +1.4 100,263 - Ac3H11_274 0.64 -0.7 100,263 - Ac3H11_274 0.64 +0.4 100,263 - Ac3H11_274 0.64 +1.0 100,263 - Ac3H11_274 0.64 +2.9 100,263 - Ac3H11_274 0.64 +0.4 100,293 + Ac3H11_274 0.66 -1.2 100,293 + Ac3H11_274 0.66 +1.3 100,294 - Ac3H11_274 0.66 +0.7 100,294 - Ac3H11_274 0.66 +1.0 100,294 - Ac3H11_274 0.66 -1.9 100,304 + Ac3H11_274 0.67 +0.3 100,304 + Ac3H11_274 0.67 -0.1 100,304 + Ac3H11_274 0.67 +0.3 100,304 + Ac3H11_274 0.67 +1.8 100,304 + Ac3H11_274 0.67 -0.2 100,304 + Ac3H11_274 0.67 -2.7 100,304 + Ac3H11_274 0.67 +0.9 100,305 - Ac3H11_274 0.67 +1.0 100,305 - Ac3H11_274 0.67 +0.3 100,305 - Ac3H11_274 0.67 -1.2 100,305 - Ac3H11_274 0.67 +0.0 100,305 - Ac3H11_274 0.67 -0.9 100,305 - Ac3H11_274 0.67 -1.0 100,305 - Ac3H11_274 0.67 +0.4 100,305 - Ac3H11_274 0.67 -2.5 100,343 + Ac3H11_274 0.70 +1.2 100,343 + Ac3H11_274 0.70 -0.2 100,343 + Ac3H11_274 0.70 -2.2 100,343 + Ac3H11_274 0.70 +2.4 100,343 + Ac3H11_274 0.70 +1.5 100,343 + Ac3H11_274 0.70 -1.0 100,343 + Ac3H11_274 0.70 -1.5 100,343 + Ac3H11_274 0.70 -1.0 100,344 - Ac3H11_274 0.70 -0.9 100,344 - Ac3H11_274 0.70 +0.8 100,344 - Ac3H11_274 0.70 +1.7 100,357 + Ac3H11_274 0.71 -0.5 100,357 + Ac3H11_274 0.71 -0.4 100,357 + Ac3H11_274 0.71 +1.0 100,358 - Ac3H11_274 0.71 +0.7 100,361 + Ac3H11_274 0.72 +1.3 100,361 + Ac3H11_274 0.72 -0.7 100,361 + Ac3H11_274 0.72 +0.5 100,361 + Ac3H11_274 0.72 +1.0 100,361 + Ac3H11_274 0.72 -0.0 100,361 + Ac3H11_274 0.72 -0.5 100,361 + Ac3H11_274 0.72 -2.1 100,361 + Ac3H11_274 0.72 -2.1 100,361 + Ac3H11_274 0.72 +1.4 100,362 - Ac3H11_274 0.72 -0.1 100,362 - Ac3H11_274 0.72 -0.6 100,362 - Ac3H11_274 0.72 -0.1 100,362 - Ac3H11_274 0.72 +0.3 100,362 - Ac3H11_274 0.72 +0.7 100,424 + Ac3H11_274 0.77 -2.2 100,424 + Ac3H11_274 0.77 -0.9 100,424 + Ac3H11_274 0.77 +0.7 100,424 + Ac3H11_274 0.77 -1.8 100,424 + Ac3H11_274 0.77 -0.2 100,424 + Ac3H11_274 0.77 -1.2 100,424 + Ac3H11_274 0.77 -0.8 100,424 + Ac3H11_274 0.77 +0.8 100,424 + Ac3H11_274 0.77 +0.5 100,424 + Ac3H11_274 0.77 -0.0 100,424 + Ac3H11_274 0.77 +2.0 100,424 + Ac3H11_274 0.77 +1.5 100,424 + Ac3H11_274 0.77 +1.6 100,424 + Ac3H11_274 0.77 -2.0 100,424 + Ac3H11_274 0.77 -1.2 100,424 + Ac3H11_274 0.77 +1.0 100,424 + Ac3H11_274 0.77 -1.2 100,424 + Ac3H11_274 0.77 +0.1 100,424 + Ac3H11_274 0.77 -1.3 100,425 - Ac3H11_274 0.77 +1.2 100,425 - Ac3H11_274 0.77 +0.9 100,425 - Ac3H11_274 0.77 +1.0 100,425 - Ac3H11_274 0.77 -1.4 100,425 - Ac3H11_274 0.77 -0.6 100,425 - Ac3H11_274 0.77 -0.4 100,425 - Ac3H11_274 0.77 -0.0 100,425 - Ac3H11_274 0.77 -0.6 100,425 - Ac3H11_274 0.77 +1.8 100,425 - Ac3H11_274 0.77 +1.5 100,425 - Ac3H11_274 0.77 -0.3 100,425 - Ac3H11_274 0.77 +0.4 100,425 - Ac3H11_274 0.77 -0.9 100,425 - Ac3H11_274 0.77 -0.5 100,425 - Ac3H11_274 0.77 -2.2 100,586 + Ac3H11_274 0.90 +0.8 100,586 + Ac3H11_274 0.90 +0.7 100,586 + Ac3H11_274 0.90 -0.8 100,587 - Ac3H11_274 0.90 -0.6 100,587 - Ac3H11_274 0.90 +0.7 100,587 - Ac3H11_274 0.90 +1.5 100,592 + +0.5 100,592 + -0.5 100,592 + -0.9 100,593 - -0.0 100,593 - -0.2 100,593 - -1.0 100,593 - -1.9 100,593 - -1.2 100,593 - +2.3 100,593 - -0.1 100,610 + -0.3 100,610 + +1.3 100,610 + +1.1 100,610 + +1.2 100,610 + -2.2 100,610 + -0.5 100,611 - +1.3 100,611 - -1.1 100,611 - -0.4 100,611 - +0.6 100,611 - +0.2 100,611 - +0.2 100,611 - -0.7 100,611 - -2.2 100,611 - -0.5 100,611 - -1.6 100,611 - -1.7 100,611 - -1.2 100,611 - -0.6 100,615 + +0.9 100,625 + +0.1 100,625 + +0.5 100,625 + +0.2 100,625 + -0.0 100,626 - +0.6 100,626 - -1.8 100,626 - +0.4 100,626 - -0.2 100,831 + Ac3H11_275 0.63 +1.6 100,831 + Ac3H11_275 0.63 -0.8 100,831 + Ac3H11_275 0.63 +0.2 100,831 + Ac3H11_275 0.63 -2.0 100,832 - Ac3H11_275 0.64 -0.4 100,832 - Ac3H11_275 0.64 +1.4 100,832 - Ac3H11_275 0.64 +1.2 100,832 - Ac3H11_275 0.64 -1.1 100,832 - Ac3H11_275 0.64 -0.7 100,950 - +1.3 101,235 + Ac3H11_276 0.48 +1.2 101,235 + Ac3H11_276 0.48 +0.5 101,235 + Ac3H11_276 0.48 +0.1 101,235 + Ac3H11_276 0.48 -0.6 101,235 + Ac3H11_276 0.48 +1.1 101,235 + Ac3H11_276 0.48 -0.4 101,236 - Ac3H11_276 0.48 -2.5 101,236 - Ac3H11_276 0.48 -0.2 101,236 - Ac3H11_276 0.48 +0.8 101,236 - Ac3H11_276 0.48 +0.5 101,236 - Ac3H11_276 0.48 +0.5 101,236 - Ac3H11_276 0.48 +1.3 101,236 - Ac3H11_276 0.48 +0.9 101,236 - Ac3H11_276 0.48 -0.1 101,236 - Ac3H11_276 0.48 -1.9 101,236 - Ac3H11_276 0.48 -0.2 101,298 + Ac3H11_276 0.59 +0.7 101,298 + Ac3H11_276 0.59 +0.5 101,299 - Ac3H11_276 0.59 +2.3 101,299 - Ac3H11_276 0.59 -0.1 101,299 - Ac3H11_276 0.59 +0.2 101,409 + Ac3H11_276 0.79 -0.6 101,410 - Ac3H11_276 0.79 +0.5 101,519 + -0.3 101,519 + +0.1 101,523 + -0.3 101,523 + -1.3 101,523 + -2.2 101,523 + -0.9 101,523 + +0.4 101,523 + +1.4 101,523 + -2.3 101,523 + -0.9 101,523 + +0.8 101,523 + -0.8 101,524 - +1.6 101,524 - -0.2 101,524 - -0.1 101,524 - +2.1 101,524 - +2.0 101,524 - +1.3 101,524 - -1.2 101,524 - -0.9 101,524 - +0.6 101,524 - -0.0 101,524 - -1.9 101,524 - -0.5 101,524 - +1.0 101,524 - -0.7 101,536 + +0.3 101,536 + -0.9 101,579 + -0.6 101,579 + -0.0 101,634 + -2.8 101,666 + Ac3H11_277 0.12 +0.8 101,889 + Ac3H11_277 0.37 -0.4 101,889 + Ac3H11_277 0.37 -0.9 101,889 + Ac3H11_277 0.37 -1.3 101,892 + Ac3H11_277 0.37 -2.2 101,892 + Ac3H11_277 0.37 -0.3 101,892 + Ac3H11_277 0.37 -0.8 101,892 + Ac3H11_277 0.37 -1.1 101,892 + Ac3H11_277 0.37 -0.3 101,892 + Ac3H11_277 0.37 -0.4 101,973 + Ac3H11_277 0.46 -2.3 101,973 + Ac3H11_277 0.46 -0.4 101,973 + Ac3H11_277 0.46 -0.5 101,973 + Ac3H11_277 0.46 -2.1 101,973 + Ac3H11_277 0.46 -1.7 101,973 + Ac3H11_277 0.46 -2.9 102,106 + Ac3H11_277 0.61 -0.1 102,106 + Ac3H11_277 0.61 +0.0 102,106 + Ac3H11_277 0.61 +0.7 102,126 + Ac3H11_277 0.63 -1.3 102,126 + Ac3H11_277 0.63 +0.1 102,126 + Ac3H11_277 0.63 -0.5
Or see this region's nucleotide sequence